Functional enrichment analysis of the 28 DNB genes identified for ESCC. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Quantitative performance comparison of our method and five multilayer network ranking baselines on the GAC dataset across multiple evaluation metrics. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Simulation networks and gene expression analysis across disease states. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

UpSet diagram illustrating the overlap of DNBs selected by our method and top-ranked genes by the 13 baseline centrality-based ranking algorithms. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Mean expression levels of biomarker genes across various disease states. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Overview of the TransMarker framework for identifying DNBs from single cell time course data. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

UMAP visualizations of extracted CD8⁺ T and CD4⁺ T cell barcodes, employed for downstream subsequent single-cell trajectory and classification analyses.... gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Comparison of Gene Discovery and Performance Evaluation with Baseline Methods. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Ablation studies and performance evaluation under varying training conditions. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Robustness of TransMarker concerning the selection and completeness of the prior knowledge network. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Case study on Esophageal Squamous Cell Carcinoma (ESCC). gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Functional enrichment analysis of the DNBs identified for GAC. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Gene regulatory networks for different states of GAC post-rewiring. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Classification performance across the three simulation settings. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

Robustness analysis of the entropic regularization parameter in the Gromov–Wasserstein alignment step of TransMarker. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”

classification results on simulated datasets and biomarkers and classification results for GAC dataset. gan Fatemeh Keikha (20917848)

Awduron Eraill: “...Chuanyuan Wang (22676721)...”