Mean contrast and signal strength values for genotypes of SNP with 1, 2, 3 and 4 different genotypes (from left to right) for fitPoly (above) and GenoTriplo (under) methods. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Illustration of genotype determination for 1; 2 or 3; and 4 clusters identified for a given SNP. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Number of offspring as a function of the number of mismatches for the best couple (blue) and the second-best couple (red) found by APIS parentage assignment. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Algorithm stages for the clustering phase. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Number of markers visualized per category, number best genotyped by GenoTriplo, by fitPoly; and corresponding rate of concordant genotypes between methods. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Mean contrast and distances between clusters from 1803 random markers (50.000 points on the graph). by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Example of implementation of the additional step to account for highly shifted contrast signal. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Number of markers by categories for the different parameters used in clustering phase. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Examples of distribution on the axes of contrast and signal strength of genotypes identified by GenoTriplo for each category of markers. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Table with the respective number of SNPs with 1, 2 3 or 4 genotypes identified with GenoTriplo or fitPoly. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”

Mean Contrast and SigStren value for each marker genotype given by either GenoTriplo or ploidyClassifier. by Julien Roche (611898)

Other Authors: “…Mathieu Besson (6525281)…”