Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)

<p dir="ltr">Supplementary results tables and figures for sample QC and downstream analysis for genome-wide association study of major depression.</p><p><br></p><h4>Tables</h4><ul><li>multi-SNP-based conditional and joint (COJO) associa...

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Príomhchruthaitheoir: Mark James Adams (748366) (author)
Rannpháirtithe: Cathryn Lewis (4097881) (author), Andrew Mcintosh (769871) (author)
Foilsithe / Cruthaithe: 2025
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author Mark James Adams (748366)
author2 Cathryn Lewis (4097881)
Andrew Mcintosh (769871)
author2_role author
author
author_facet Mark James Adams (748366)
Cathryn Lewis (4097881)
Andrew Mcintosh (769871)
author_role author
dc.creator.none.fl_str_mv Mark James Adams (748366)
Cathryn Lewis (4097881)
Andrew Mcintosh (769871)
dc.date.none.fl_str_mv 2025-11-26T09:24:47Z
dc.identifier.none.fl_str_mv 10.6084/m9.figshare.27089614.v3
dc.relation.none.fl_str_mv https://figshare.com/articles/online resource/Supplementary_Results_for_GWAS_meta-analysis_of_major_depression_PGC_MDD2025_/27089614
dc.rights.none.fl_str_mv CC0
info:eu-repo/semantics/openAccess
dc.subject.none.fl_str_mv Genomics
Psychiatry (incl. psychotherapy)
major depression
genome-wide association study
meta-analysis
major depressive disorder
dc.title.none.fl_str_mv Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)
dc.type.none.fl_str_mv Text
Online resource
info:eu-repo/semantics/publishedVersion
text
description <p dir="ltr">Supplementary results tables and figures for sample QC and downstream analysis for genome-wide association study of major depression.</p><p><br></p><h4>Tables</h4><ul><li>multi-SNP-based conditional and joint (COJO) associations <i>[Online Results (COJO).xlsx]</i></li><li>fastBAT gene association tests <i>[Online Results (fastBAT).xlsx]</i></li><li>Hi-C chromatin mapping <i>[Online Results (hiC).xlsx]</i></li><li>LDSC genetic correlation estimates <i>[Online Results (ldsc with OpenGWAS).xlsx]</i></li><li>DrugTargetor enrichment tests <i>[Online Results (DrugTargetor).xlsx]</i></li></ul><h4>Figures</h4><p><br></p><ul><li>Principal components plots for genotyped studies <i>[Online Results (QC PCA plot).docx]</i></li><li>Single cell enrichment results <i>[Online results (Bulk and Cell enrich)- combine.docx]</i></li><li>Polygenic risk score results <i>[Online results (various PRS plots).docx]</i></li><li>fastBAT gene association manhattan plot <i>[Online Results (fastBAT Manhattan).docx]</i></li></ul><table><tr><td><p><br></p></td></tr></table><p dir="ltr">Updates</p><ul><li>2025-11-26: Restore singleton SNPs to EUR COJO table.</li></ul><p></p>
eu_rights_str_mv openAccess
id Manara_1d393e79fadcaaa99d996d310911170c
identifier_str_mv 10.6084/m9.figshare.27089614.v3
network_acronym_str Manara
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oai_identifier_str oai:figshare.com:article/27089614
publishDate 2025
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spelling Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)Mark James Adams (748366)Cathryn Lewis (4097881)Andrew Mcintosh (769871)GenomicsPsychiatry (incl. psychotherapy)major depressiongenome-wide association studymeta-analysismajor depressive disorder<p dir="ltr">Supplementary results tables and figures for sample QC and downstream analysis for genome-wide association study of major depression.</p><p><br></p><h4>Tables</h4><ul><li>multi-SNP-based conditional and joint (COJO) associations <i>[Online Results (COJO).xlsx]</i></li><li>fastBAT gene association tests <i>[Online Results (fastBAT).xlsx]</i></li><li>Hi-C chromatin mapping <i>[Online Results (hiC).xlsx]</i></li><li>LDSC genetic correlation estimates <i>[Online Results (ldsc with OpenGWAS).xlsx]</i></li><li>DrugTargetor enrichment tests <i>[Online Results (DrugTargetor).xlsx]</i></li></ul><h4>Figures</h4><p><br></p><ul><li>Principal components plots for genotyped studies <i>[Online Results (QC PCA plot).docx]</i></li><li>Single cell enrichment results <i>[Online results (Bulk and Cell enrich)- combine.docx]</i></li><li>Polygenic risk score results <i>[Online results (various PRS plots).docx]</i></li><li>fastBAT gene association manhattan plot <i>[Online Results (fastBAT Manhattan).docx]</i></li></ul><table><tr><td><p><br></p></td></tr></table><p dir="ltr">Updates</p><ul><li>2025-11-26: Restore singleton SNPs to EUR COJO table.</li></ul><p></p>2025-11-26T09:24:47ZTextOnline resourceinfo:eu-repo/semantics/publishedVersiontext10.6084/m9.figshare.27089614.v3https://figshare.com/articles/online resource/Supplementary_Results_for_GWAS_meta-analysis_of_major_depression_PGC_MDD2025_/27089614CC0info:eu-repo/semantics/openAccessoai:figshare.com:article/270896142025-11-26T09:24:47Z
spellingShingle Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)
Mark James Adams (748366)
Genomics
Psychiatry (incl. psychotherapy)
major depression
genome-wide association study
meta-analysis
major depressive disorder
status_str publishedVersion
title Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)
title_full Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)
title_fullStr Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)
title_full_unstemmed Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)
title_short Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)
title_sort Supplementary Results for GWAS meta-analysis of major depression (PGC MDD2025)
topic Genomics
Psychiatry (incl. psychotherapy)
major depression
genome-wide association study
meta-analysis
major depressive disorder