Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses.
<p>Clustal W software was used for the <i>eukNR</i> alignment and then Bayesian inference was used to infer the tree. The four <i>Ampelomyces</i> strains that have whole genome sequencing assemblies are indicated in bold.</p> <p>(PPTX)</p>
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2025
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| _version_ | 1852014222755495936 |
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| author | Lauren Goldspink (813789) |
| author2 | Alexandros G. Sotiropoulos (11501680) Alexander Idnurm (58590) Gavin J. Ash (22783967) John D. W. Dearnaley (9129941) Morwenna Boddington (22783970) Aftab Ahmad (196783) Márk Z. Németh (9129965) Alexandra Pintye (183599) Markus Gorfer (120750) Hyeon-Dong Shin (710995) Gábor M. Kovács (7848494) Niloofar Vaghefi (4532353) Levente Kiss (227836) |
| author2_role | author author author author author author author author author author author author author |
| author_facet | Lauren Goldspink (813789) Alexandros G. Sotiropoulos (11501680) Alexander Idnurm (58590) Gavin J. Ash (22783967) John D. W. Dearnaley (9129941) Morwenna Boddington (22783970) Aftab Ahmad (196783) Márk Z. Németh (9129965) Alexandra Pintye (183599) Markus Gorfer (120750) Hyeon-Dong Shin (710995) Gábor M. Kovács (7848494) Niloofar Vaghefi (4532353) Levente Kiss (227836) |
| author_role | author |
| dc.creator.none.fl_str_mv | Lauren Goldspink (813789) Alexandros G. Sotiropoulos (11501680) Alexander Idnurm (58590) Gavin J. Ash (22783967) John D. W. Dearnaley (9129941) Morwenna Boddington (22783970) Aftab Ahmad (196783) Márk Z. Németh (9129965) Alexandra Pintye (183599) Markus Gorfer (120750) Hyeon-Dong Shin (710995) Gábor M. Kovács (7848494) Niloofar Vaghefi (4532353) Levente Kiss (227836) |
| dc.date.none.fl_str_mv | 2025-12-04T18:50:17Z |
| dc.identifier.none.fl_str_mv | 10.1371/journal.pone.0322842.s002 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/presentation/Unrooted_tree_of_the_21_Australian_and_32_reference_i_Ampelomyces_i_strains_based_on_eukaryotic_nitrate_reductase_gene_i_eukNR_i_sequence_analyses_/30793253 |
| dc.rights.none.fl_str_mv | CC BY 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Microbiology Cell Biology Genetics Molecular Biology Evolutionary Biology Ecology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified received little attention pycnidial fungi belonging e ., consisted div >< p powdery mildew infections specific mycoparasitic relationships sparse regions interspersed powdery mildews (< diverse powdery mildews de novo </ 32 reference strains delimited earlier based australian strains belonged provide genome assemblies powdery mildews 21 australian genome sequencing genome assemblies erysiphaceae </ ascomycota </ ampelomyces </ strains isolated strains carried rich regions quality assemblies phylogenetic analyses overseas revealed organisms co north america new high mycoparasitic interactions mycoparasites wherever mycoparasites isolated many plants important resources high completeness future analyses classic examples bipartite structure biocontrol agents based annotations |
| dc.title.none.fl_str_mv | Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses. |
| dc.type.none.fl_str_mv | Text Presentation info:eu-repo/semantics/publishedVersion text |
| description | <p>Clustal W software was used for the <i>eukNR</i> alignment and then Bayesian inference was used to infer the tree. The four <i>Ampelomyces</i> strains that have whole genome sequencing assemblies are indicated in bold.</p> <p>(PPTX)</p> |
| eu_rights_str_mv | openAccess |
| id | Manara_256b828291393ee73dc4dc9727df6c19 |
| identifier_str_mv | 10.1371/journal.pone.0322842.s002 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/30793253 |
| publishDate | 2025 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY 4.0 |
| spelling | Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses.Lauren Goldspink (813789)Alexandros G. Sotiropoulos (11501680)Alexander Idnurm (58590)Gavin J. Ash (22783967)John D. W. Dearnaley (9129941)Morwenna Boddington (22783970)Aftab Ahmad (196783)Márk Z. Németh (9129965)Alexandra Pintye (183599)Markus Gorfer (120750)Hyeon-Dong Shin (710995)Gábor M. Kovács (7848494)Niloofar Vaghefi (4532353)Levente Kiss (227836)MicrobiologyCell BiologyGeneticsMolecular BiologyEvolutionary BiologyEcologyEnvironmental Sciences not elsewhere classifiedBiological Sciences not elsewhere classifiedreceived little attentionpycnidial fungi belonginge ., consisteddiv >< ppowdery mildew infectionsspecific mycoparasitic relationshipssparse regions interspersedpowdery mildews (<diverse powdery mildewsde novo </32 reference strainsdelimited earlier basedaustralian strains belongedprovide genome assembliespowdery mildews21 australiangenome sequencinggenome assemblieserysiphaceae </ascomycota </ampelomyces </strains isolatedstrains carriedrich regionsquality assembliesphylogenetic analysesoverseas revealedorganisms conorth americanew highmycoparasitic interactionsmycoparasites wherevermycoparasites isolatedmany plantsimportant resourceshigh completenessfuture analysesclassic examplesbipartite structurebiocontrol agentsbased annotations<p>Clustal W software was used for the <i>eukNR</i> alignment and then Bayesian inference was used to infer the tree. The four <i>Ampelomyces</i> strains that have whole genome sequencing assemblies are indicated in bold.</p> <p>(PPTX)</p>2025-12-04T18:50:17ZTextPresentationinfo:eu-repo/semantics/publishedVersiontext10.1371/journal.pone.0322842.s002https://figshare.com/articles/presentation/Unrooted_tree_of_the_21_Australian_and_32_reference_i_Ampelomyces_i_strains_based_on_eukaryotic_nitrate_reductase_gene_i_eukNR_i_sequence_analyses_/30793253CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/307932532025-12-04T18:50:17Z |
| spellingShingle | Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses. Lauren Goldspink (813789) Microbiology Cell Biology Genetics Molecular Biology Evolutionary Biology Ecology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified received little attention pycnidial fungi belonging e ., consisted div >< p powdery mildew infections specific mycoparasitic relationships sparse regions interspersed powdery mildews (< diverse powdery mildews de novo </ 32 reference strains delimited earlier based australian strains belonged provide genome assemblies powdery mildews 21 australian genome sequencing genome assemblies erysiphaceae </ ascomycota </ ampelomyces </ strains isolated strains carried rich regions quality assemblies phylogenetic analyses overseas revealed organisms co north america new high mycoparasitic interactions mycoparasites wherever mycoparasites isolated many plants important resources high completeness future analyses classic examples bipartite structure biocontrol agents based annotations |
| status_str | publishedVersion |
| title | Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses. |
| title_full | Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses. |
| title_fullStr | Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses. |
| title_full_unstemmed | Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses. |
| title_short | Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses. |
| title_sort | Unrooted tree of the 21 Australian and 32 reference <i>Ampelomyces</i> strains based on eukaryotic nitrate reductase gene (<i>eukNR</i>) sequence analyses. |
| topic | Microbiology Cell Biology Genetics Molecular Biology Evolutionary Biology Ecology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified received little attention pycnidial fungi belonging e ., consisted div >< p powdery mildew infections specific mycoparasitic relationships sparse regions interspersed powdery mildews (< diverse powdery mildews de novo </ 32 reference strains delimited earlier based australian strains belonged provide genome assemblies powdery mildews 21 australian genome sequencing genome assemblies erysiphaceae </ ascomycota </ ampelomyces </ strains isolated strains carried rich regions quality assemblies phylogenetic analyses overseas revealed organisms co north america new high mycoparasitic interactions mycoparasites wherever mycoparasites isolated many plants important resources high completeness future analyses classic examples bipartite structure biocontrol agents based annotations |