Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental Stresses
Basic leucine zipper (bZIP) transcription factors play crucial roles in various biological processes and responses to environmental stresses. However, the functions of the <i>bZIP</i> family in tea plants remain largely unexplored. Here, we identified 74 <i>bZIP</i> genes in...
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| المؤلف الرئيسي: | |
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| مؤلفون آخرون: | , , , , , , , |
| منشور في: |
2024
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| الموضوعات: | |
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إضافة وسم
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| _version_ | 1852025835687510016 |
|---|---|
| author | Man Zhang (466843) |
| author2 | Yanhui Liu (151413) Jianlong Li (489384) Bo Zhou (15092) Yiyong Chen (506935) Hao Tang (44155) Yingying Cui (539426) Jiayu Liu (3951515) Jinchi Tang (6810599) |
| author2_role | author author author author author author author author |
| author_facet | Man Zhang (466843) Yanhui Liu (151413) Jianlong Li (489384) Bo Zhou (15092) Yiyong Chen (506935) Hao Tang (44155) Yingying Cui (539426) Jiayu Liu (3951515) Jinchi Tang (6810599) |
| author_role | author |
| dc.creator.none.fl_str_mv | Man Zhang (466843) Yanhui Liu (151413) Jianlong Li (489384) Bo Zhou (15092) Yiyong Chen (506935) Hao Tang (44155) Yingying Cui (539426) Jiayu Liu (3951515) Jinchi Tang (6810599) |
| dc.date.none.fl_str_mv | 2024-10-19T13:35:55Z |
| dc.identifier.none.fl_str_mv | 10.1021/acs.jafc.4c06725.s002 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/dataset/Evolutionary_and_Expression_Analyses_of_the_i_bZIP_i_Family_in_Tea_Plants_i_Camellia_sinensis_i_and_Functional_Characterization_of_i_CsbZIP3_42_6_i_in_Response_to_Environmental_Stresses/27262392 |
| dc.rights.none.fl_str_mv | CC BY-NC 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Cell Biology Genetics Molecular Biology Evolutionary Biology Ecology Developmental Biology Infectious Diseases Plant Biology Computational Biology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified various biological processes overall plant health csbzip42 could interact 12 phylogenetic groups improving stress tolerance varying expression levels camellia sinensis </ tea plants (< salt stress responses tea plants stress responses csbzip </ 6 </ term evolution potential roles potential applications positive regulators phytohormone signaling pathogen infection negative regulators gene structures functional characterization expression analyses environmental stresses conserved motifs |
| dc.title.none.fl_str_mv | Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental Stresses |
| dc.type.none.fl_str_mv | Dataset info:eu-repo/semantics/publishedVersion dataset |
| description | Basic leucine zipper (bZIP) transcription factors play crucial roles in various biological processes and responses to environmental stresses. However, the functions of the <i>bZIP</i> family in tea plants remain largely unexplored. Here, we identified 74 <i>bZIP</i> genes in tea plants (<i>Camellia sinensis</i>) and classified them into 12 phylogenetic groups, supported by analyses of conserved motifs and gene structures. Cis-element analysis provided insights into the potential roles of <i>CsbZIP</i> genes in phytohormone signaling and stress responses. Tissue-specific expression analysis demonstrated differential expression profiles of <i>CsbZIP</i> genes, suggesting their tissue- and stage-specific functions. Additionally, varying expression levels under different abiotic stresses indicated functional divergence of the <i>CsbZIP</i> family during the long-term evolution. Notably, <i>CsbZIP3/42/6</i> were identified as positive regulators of drought and salt stress responses but negative regulators in response to pathogen infection, and CsbZIP42 could interact with CsbZIP3 and CsbZIP6 in regulating these environmental stresses. This study provides valuable information on potential applications for improving stress tolerance and overall plant health of tea plants. |
| eu_rights_str_mv | openAccess |
| id | Manara_2ceee5c0067ed482210c4e2df00ebb49 |
| identifier_str_mv | 10.1021/acs.jafc.4c06725.s002 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/27262392 |
| publishDate | 2024 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY-NC 4.0 |
| spelling | Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental StressesMan Zhang (466843)Yanhui Liu (151413)Jianlong Li (489384)Bo Zhou (15092)Yiyong Chen (506935)Hao Tang (44155)Yingying Cui (539426)Jiayu Liu (3951515)Jinchi Tang (6810599)Cell BiologyGeneticsMolecular BiologyEvolutionary BiologyEcologyDevelopmental BiologyInfectious DiseasesPlant BiologyComputational BiologyEnvironmental Sciences not elsewhere classifiedBiological Sciences not elsewhere classifiedvarious biological processesoverall plant healthcsbzip42 could interact12 phylogenetic groupsimproving stress tolerancevarying expression levelscamellia sinensis </tea plants (<salt stress responsestea plantsstress responsescsbzip </6 </term evolutionpotential rolespotential applicationspositive regulatorsphytohormone signalingpathogen infectionnegative regulatorsgene structuresfunctional characterizationexpression analysesenvironmental stressesconserved motifsBasic leucine zipper (bZIP) transcription factors play crucial roles in various biological processes and responses to environmental stresses. However, the functions of the <i>bZIP</i> family in tea plants remain largely unexplored. Here, we identified 74 <i>bZIP</i> genes in tea plants (<i>Camellia sinensis</i>) and classified them into 12 phylogenetic groups, supported by analyses of conserved motifs and gene structures. Cis-element analysis provided insights into the potential roles of <i>CsbZIP</i> genes in phytohormone signaling and stress responses. Tissue-specific expression analysis demonstrated differential expression profiles of <i>CsbZIP</i> genes, suggesting their tissue- and stage-specific functions. Additionally, varying expression levels under different abiotic stresses indicated functional divergence of the <i>CsbZIP</i> family during the long-term evolution. Notably, <i>CsbZIP3/42/6</i> were identified as positive regulators of drought and salt stress responses but negative regulators in response to pathogen infection, and CsbZIP42 could interact with CsbZIP3 and CsbZIP6 in regulating these environmental stresses. This study provides valuable information on potential applications for improving stress tolerance and overall plant health of tea plants.2024-10-19T13:35:55ZDatasetinfo:eu-repo/semantics/publishedVersiondataset10.1021/acs.jafc.4c06725.s002https://figshare.com/articles/dataset/Evolutionary_and_Expression_Analyses_of_the_i_bZIP_i_Family_in_Tea_Plants_i_Camellia_sinensis_i_and_Functional_Characterization_of_i_CsbZIP3_42_6_i_in_Response_to_Environmental_Stresses/27262392CC BY-NC 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/272623922024-10-19T13:35:55Z |
| spellingShingle | Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental Stresses Man Zhang (466843) Cell Biology Genetics Molecular Biology Evolutionary Biology Ecology Developmental Biology Infectious Diseases Plant Biology Computational Biology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified various biological processes overall plant health csbzip42 could interact 12 phylogenetic groups improving stress tolerance varying expression levels camellia sinensis </ tea plants (< salt stress responses tea plants stress responses csbzip </ 6 </ term evolution potential roles potential applications positive regulators phytohormone signaling pathogen infection negative regulators gene structures functional characterization expression analyses environmental stresses conserved motifs |
| status_str | publishedVersion |
| title | Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental Stresses |
| title_full | Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental Stresses |
| title_fullStr | Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental Stresses |
| title_full_unstemmed | Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental Stresses |
| title_short | Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental Stresses |
| title_sort | Evolutionary and Expression Analyses of the <i>bZIP</i> Family in Tea Plants (<i>Camellia sinensis</i>) and Functional Characterization of <i>CsbZIP3/42/6</i> in Response to Environmental Stresses |
| topic | Cell Biology Genetics Molecular Biology Evolutionary Biology Ecology Developmental Biology Infectious Diseases Plant Biology Computational Biology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified various biological processes overall plant health csbzip42 could interact 12 phylogenetic groups improving stress tolerance varying expression levels camellia sinensis </ tea plants (< salt stress responses tea plants stress responses csbzip </ 6 </ term evolution potential roles potential applications positive regulators phytohormone signaling pathogen infection negative regulators gene structures functional characterization expression analyses environmental stresses conserved motifs |