Description of systems studied.

Description of systems studied.

<p>The composition of the bilayer in the <i>Surface</i> model was set as 55% DOPC, 21% DPPE, 11% POPI, 9% cholesterol and 4% DOPS. Each membrane contained 1200 total lipids (600 per leaflet).</p> <p>(XLSX)</p>

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Podrobná bibliografie
Hlavní autor:	Oluwatoyin Campbell (14392137) (author)
Další autoři:	Dina Dahhan (22683620) (author), Viviana Monje (2056069) (author)
Vydáno:	2025
Témata:	Biophysics Biochemistry Cell Biology Genetics Molecular Biology Biotechnology Cancer Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified Physical Sciences not elsewhere classified Information Systems not elsewhere classified process may help complex transmembrane topology comparing dimer interactions aqueous solution versus promote p7 oligomerization protein residue alignment p7 dimers driven alignment underlie health study demonstrates particularly involving often composed molecular mechanisms key residues hydrophobic contacts hydrogen bonding first helix explain assembly dynamic contributors channel assembly
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Podobné jednotky

Suggested mechanism of p7 dimerization at the ER membrane surface, based on results from this study.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Correlation of protein and lipid motions in the <i>Surface</i> model.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Protein-lipid interactions in the <i>Surface</i> model.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Energetics of protein interactions.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Residue contact comparison with reference dimer structure.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Protein conformational dynamics induced by presence of a lipid membrane.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Initial simulation coordinates.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Protein-lipid dynamic cross correlation maps for <i>Surface</i> replicas 2 and 4 during the entire trajectory.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Frequency of hydrogen bonds between individual residues and lipid species during the last half of trajectory (500 ns) in the <i>Surface</i> model.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Snapshot showing cholesterol contacts with the N-terminus of p2 and H2 and H3 of p1 in the <i>Surface</i> model.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Coulomb (electrostatic), Lennard-Jones (hydrophobic), and total interaction energy of interacting monomer helices in each model.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Surface replica 4 structural evaluation.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Tilt angle conformational landscapes of residues involved in 1-to-1 helix contacts during the last 500 ns of trajectory in the <i>Surface</i> model.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Tilt angle conformational landscapes of residues involved in 1-to-1 helix contacts during the last 200 ns of trajectory in the <i>Sep</i> model.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Distance of each amino acid from the average position of phosphorus atoms in the contacting membrane leaflet in the <i>Surface</i> systems.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

RMSF per residue in individual p7 monomers for each <i>Sep</i> and <i>Surface</i> model replicas.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Root mean square deviation measurements of monomers.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Deviations of the <i>Bound</i> model protein dimer conformation from the reference crystal structure of the channel (PDBID: 2M6X).
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Initial positioning of monomers in replicas 1, 2, 3 and 4 of <i>Surface</i> model.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

List of protein residues and selected atoms to define the tilt angle vectors.
Autor: Oluwatoyin Campbell (14392137)
Vydáno: (2025)

Structural Evidence of Interanionic Hydrogen Bonding in Phosphoric Acid Solutions
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Vydáno: (2025)

A Series of Experiments on Criticality and Reflector Reactivity Worth in FCA-XXIII-1 and FCA-XXIV-1 Assemblies Simulating a Small Fast Reactor with a Thick Stainless Steel Reflector
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Vydáno: (2025)

Transfer task (pre- and post-test) design and information alignment.
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Vydáno: (2025)

The contribution of shared rules to neural information alignment, for the first (A) and second (B) experiment half.
Autor: Denise Moerel (9080849)
Vydáno: (2025)

The time-course of information alignment, split by first and second experiment half.
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Vydáno: (2025)

The time-course of information alignment.
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Vydáno: (2025)

Information alignment between the two individuals in each pair.
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Vydáno: (2025)

Stimuli, experiment procedure, and behavioral results.
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Vydáno: (2025)

Characteristics of patients infected with norovirus GII.
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Vydáno: (2025)

Difference in viral loads in stool samples from norovirus GII-infected patients, grouped by genotype.
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Vydáno: (2025)

Distribution of norovirus genotypes and P-types detected in patients with acute gastroenteritis attending two hospitals in Thailand.
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Vydáno: (2025)

Human Values, Purpose & Meaning 2025 (Dataset)
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Vydáno: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
Autor: Neval Yilmaz (1544557)
Vydáno: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
Autor: Neval Yilmaz (1544557)
Vydáno: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
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Vydáno: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
Autor: Neval Yilmaz (1544557)
Vydáno: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
Autor: Neval Yilmaz (1544557)
Vydáno: (2025)

Metal–Ligand Cooperative Proton Transfer/Electron Transfer and Acid-Assisted Protonation Mechanism for Mo-Catalyzed Reduction of Proton and Carbon Dioxide
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Vydáno: (2025)

Description of the sampling sites. Habitats were described for the water bodies when present in the wadeable area of the shore length with a share < 5%.
Autor: Fee Nanett Trau (16734722)
Vydáno: (2025)

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