The dendrogram of clusters of Yersinia isolates based on the 0/1 matrix of successful/unsuccessful BLASTN searches for sequences of polymorphic regions across the whole genome sequences of the isolates.

Isolation sources, regions, and landscapes are marked as explained in the figure legend. The results of the BLASTN search for six polymorphic regions within protein-coding genes of the reference strain Y. pseudotuberculosis IP 32953 are represented by ‘...

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Main Author:	Aigul A. Abdirassilova (22238739) (author)
Other Authors:	Duman T. Yessimseit (22238742) (author), Altynai K. Kassenova (22238745) (author), Beck Z. Abdeliyev (22238748) (author), Zauresh B. Zhumadilova (22238751) (author), Gulnara Zh. Tokmurziyeva (22238754) (author), Galina G. Kovaleva (22238757) (author), Ziyat Zh. Abdel (22238760) (author), Tatiyana V. Meka-Mechenko (22238763) (author), Saule K. Umarova (22238766) (author), Elmira Zh. Begimbayeva (22238769) (author), Sanzhar D. Agzam (22238772) (author), Vladimir L. Motin (22238775) (author), Oleg N. Reva (7870631) (author), Altyn K. Rysbekova (22238778) (author)
Published:	2025
Subjects:	Microbiology Genetics Molecular Biology Evolutionary Biology Ecology Infectious Diseases Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified shaping specific genotypes ongoing genomic surveillance novel cryptic plasmid natural plague foci genetically distinct isolate cas insertion patterns 99 diagnostic polymorphisms investigated using whole whole genome sequencing similar environmental conditions div >< p associated genetic elements identifying genetic polymorphisms yersinia pestis </ genetic polymorphisms genome sequencing environmental conditions yersinia </ pestis </ sequenced using previously associated genetic diversity ssua </ rhas </ pseudotuberculosis </ napa </ arac </ upland regions suitable tools phylogenetic inference miseq platform med1 population med lineage likely driven findings emphasize embi region different hosts computational pipelines caucasus high biovar classification accurate assembly
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Summary:	<p>Isolation sources, regions, and landscapes are marked as explained in the figure legend. The results of the BLASTN search for six polymorphic regions within protein-coding genes of the reference strain <i><i>Y. pseudotuberculosis</i></i> IP 32953 are represented by ‘X’ symbols, indicating a negative search result, meaning that the region is either missing or modified in the subject genome.</p>

The dendrogram of clusters of <i>Yersinia</i> isolates based on the 0/1 matrix of successful/unsuccessful BLASTN searches for sequences of polymorphic regions across the whole genome sequences of the isolates.

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