The dendrogram of clusters of <i>Yersinia</i> isolates based on the 0/1 matrix of successful/unsuccessful BLASTN searches for sequences of polymorphic regions across the whole genome sequences of the isolates.

The dendrogram of clusters of <i>Yersinia</i> isolates based on the 0/1 matrix of successful/unsuccessful BLASTN searches for sequences of polymorphic regions across the whole genome sequences of the isolates.

<p>Isolation sources, regions, and landscapes are marked as explained in the figure legend. The results of the BLASTN search for six polymorphic regions within protein-coding genes of the reference strain <i><i>Y. pseudotuberculosis</i></i> IP 32953 are represented by ‘...

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التفاصيل البيبلوغرافية
المؤلف الرئيسي:	Aigul A. Abdirassilova (22238739) (author)
مؤلفون آخرون:	Duman T. Yessimseit (22238742) (author), Altynai K. Kassenova (22238745) (author), Beck Z. Abdeliyev (22238748) (author), Zauresh B. Zhumadilova (22238751) (author), Gulnara Zh. Tokmurziyeva (22238754) (author), Galina G. Kovaleva (22238757) (author), Ziyat Zh. Abdel (22238760) (author), Tatiyana V. Meka-Mechenko (22238763) (author), Saule K. Umarova (22238766) (author), Elmira Zh. Begimbayeva (22238769) (author), Sanzhar D. Agzam (22238772) (author), Vladimir L. Motin (22238775) (author), Oleg N. Reva (7870631) (author), Altyn K. Rysbekova (22238778) (author)
منشور في:	2025
الموضوعات:	Microbiology Genetics Molecular Biology Evolutionary Biology Ecology Infectious Diseases Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified shaping specific genotypes ongoing genomic surveillance novel cryptic plasmid natural plague foci genetically distinct isolate cas insertion patterns 99 diagnostic polymorphisms investigated using whole whole genome sequencing similar environmental conditions div >< p associated genetic elements identifying genetic polymorphisms yersinia pestis </ genetic polymorphisms genome sequencing environmental conditions yersinia </ pestis </ sequenced using previously associated genetic diversity ssua </ rhas </ pseudotuberculosis </ napa </ arac </ upland regions suitable tools phylogenetic inference miseq platform med1 population med lineage likely driven findings emphasize embi region different hosts computational pipelines caucasus high biovar classification accurate assembly
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مواد مشابهة

Atlases of the distribution of transposons of the IS3 family and CRISPR-Cas elements in the genomes of sequenced isolates.
حسب: Aigul A. Abdirassilova (22238739)
منشور في: (2025)

Phylogenetic tree designed by the progressiveMauve alignment of chromosomal sequences of several selected <i>Yersinia</i> isolates and reference genomes.
حسب: Aigul A. Abdirassilova (22238739)
منشور في: (2025)

Diagnostic primers used in this study.
حسب: Aigul A. Abdirassilova (22238739)
منشور في: (2025)

Regions of sampling the <i>Yersinia</i> strains used in this study plotted using the program ArcMap.
حسب: Aigul A. Abdirassilova (22238739)
منشور في: (2025)

Matrix of polymorphic genetic loci.
حسب: Aigul A. Abdirassilova (22238739)
منشور في: (2025)

Genome assembly statistics.
حسب: Aigul A. Abdirassilova (22238739)
منشور في: (2025)

<i>Yersinia pestis</i> strains used in this study.
حسب: Aigul A. Abdirassilova (22238739)
منشور في: (2025)

Shapes of colonies of <i>Y. pestis</i> exemplified by strain 9_YP68_IM: A) after 12 hours; B) after 24 hours; and C) after 48 hours on Hottinger agar at 28°C; and D) after 24 hours on Hottinger agar supplemented with 1% blood hemolysate.
حسب: Aigul A. Abdirassilova (22238739)
منشور في: (2025)

Retracing the path of evolution: polymorphisms of <i>aspA</i> codon 363 shape the fitness of <i>Yersinia pestis</i>
حسب: Kai Song (107003)
منشور في: (2025)

<i>Yersinia pestis</i> genomes.fasta
حسب: Zhuofan Gao (21682439)
منشور في: (2025)

Table 4_Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model.xlsx
حسب: Sergei S. Biryukov (6034052)
منشور في: (2025)

Table 5_Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model.xlsx
حسب: Sergei S. Biryukov (6034052)
منشور في: (2025)

Table 6_Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model.xlsx
حسب: Sergei S. Biryukov (6034052)
منشور في: (2025)

Table 7_Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model.xlsx
حسب: Sergei S. Biryukov (6034052)
منشور في: (2025)

Table 3_Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model.xlsx
حسب: Sergei S. Biryukov (6034052)
منشور في: (2025)

Table 8_Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model.xlsx
حسب: Sergei S. Biryukov (6034052)
منشور في: (2025)

Presentation 1_Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model.pptx
حسب: Sergei S. Biryukov (6034052)
منشور في: (2025)

Table 2_Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model.xlsx
حسب: Sergei S. Biryukov (6034052)
منشور في: (2025)

Table 1_Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model.xlsx
حسب: Sergei S. Biryukov (6034052)
منشور في: (2025)

Yersinia Pestis phage carrying virulence factor genes.fasta
حسب: Zhuofan Gao (21682439)
منشور في: (2025)

<i>Yersinia Pestis</i> phage carrying virulence factor genes
حسب: Zhuofan Gao (20980319)
منشور في: (2025)

Data Sheet 1_The interplay between species and locations shapes vector fleas microbial communities in plague foci: pathogens rather than symbionts?.docx
حسب: Shahin Seidi (21390629)
منشور في: (2025)

Data Sheet 3_The interplay between species and locations shapes vector fleas microbial communities in plague foci: pathogens rather than symbionts?.xlsx
حسب: Shahin Seidi (21390629)
منشور في: (2025)

Data Sheet 2_The interplay between species and locations shapes vector fleas microbial communities in plague foci: pathogens rather than symbionts?.xlsx
حسب: Shahin Seidi (21390629)
منشور في: (2025)

Datos vigilancia epidemiologica La Hermelinda 2025
حسب: Sebastian Iglesias-Osores (8636919)
منشور في: (2025)

Molecular turn in <i>Yersinia pestis</i> pathogenesis: implications of the <i>gppA</i> frameshift for bacterial survival in human macrophage
حسب: Hongyan Chen (87846)
منشور في: (2025)

rLVS Δ<i>capB</i>/Yp F1-V single vector platform vaccine expressing <i>Yersinia pestis</i> F1 and LcrV antigens provides complete protection against lethal respiratory challenge with virulent plague bacilli
حسب: Qingmei Jia (10706481)
منشور في: (2025)

T3SS triggered LTB<sub>4</sub> synthesis differs between neutrophils and macrophages.
حسب: Amanda Brady (17847505)
منشور في: (2024)

Inflammasomes enhance LTB<sub>4</sub> synthesis in BMDMs but are dispensable in BMNs.
حسب: Amanda Brady (17847505)
منشور في: (2024)

Activation of MAPK signaling required for LTB<sub>4</sub> synthesis is independent of the T3SS.
حسب: Amanda Brady (17847505)
منشور في: (2024)

SKAP2 signaling is required for LTB<sub>4</sub> synthesis in BMNs.
حسب: Amanda Brady (17847505)
منشور في: (2024)

Influx of extracellular Ca<sup>2+</sup> is required for <i>Y</i>. <i>pestis</i> T3SS-dependent LTB<sub>4</sub> synthesis.
حسب: Amanda Brady (17847505)
منشور في: (2024)

PLC signaling is required for LTB<sub>4</sub> synthesis in BMNs.
حسب: Amanda Brady (17847505)
منشور في: (2024)

Phagocytosis is not required for LTB<sub>4</sub> synthesis in BMNs but enhances LTB<sub>4</sub> synthesis by macrophages in response to <i>Y</i>. <i>pestis</i>.
حسب: Amanda Brady (17847505)
منشور في: (2024)

T3SS-depedent LTB<sub>4</sub> synthesis is conserved in <i>S</i>. <i>enterica</i> Typhimurium and BMDMs.
حسب: Amanda Brady (17847505)
منشور في: (2024)

MAPK phosphorylation is independent of PLC signaling in BMNs.
حسب: Amanda Brady (17847505)
منشور في: (2024)

Cytochalasin D successfully inhibits BMN and BMDM phagocytosis of <i>Y</i>. <i>pestis</i>.
حسب: Amanda Brady (17847505)
منشور في: (2024)

Table 1_Genetic diversity of Hippophae rhamnoides varieties with different fruit characteristics based on whole-genome sequencing.xlsx
حسب: Nataliya V. Melnikova (7179389)
منشور في: (2025)

Supplementary file 1_A likelihood ratio framework for inferring close kinship from dynamically selected SNPs.docx
حسب: Jianye Ge (322784)
منشور في: (2025)

Table 1_A likelihood ratio framework for inferring close kinship from dynamically selected SNPs.xlsx
حسب: Jianye Ge (322784)
منشور في: (2025)

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