Principle Coordinates Analysis (PCoA) projected onto 2 dimensions between pol-wgs mixtures and nFL genome, full dataset

<p>X-axis is the first principle coordinate which explains the largest amount of data change, Y-axis is the second principle coordinate which explains the second largest amount of data change. Distances on axes summarize variability and are relative to the samples plotted and colors indicate d...

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Bibliografiske detaljer
Hovedforfatter:	August Guang (9975678) (author)
Andre forfattere:	Casey W Dunn (21263816) (author), Vlad Novitsky (3366560) (author), Mark Howison (3315450) (author), Rami Kantor (7863) (author)
Udgivet:	2025
Fag:	Genetics Molecular Biology Biotechnology Evolutionary Biology Cancer Statistics Infectious Diseases Virology Biological Sciences not elsewhere classified still broadly used mean cluster size compared tree similarity also decreased number shape alignment provides flexible approach called larger clusters identified partial pol sequences 1 near full improve phylogenetic inference long hiv sequences phylogenetic inference near full 1 sequences shape alignments pol regions new approach molecular clusters improve phylogenetic full dataset short sequences long sequences available sequences xlink "> transmission dynamics systematically masked subset dataset study subset straightforward method short hiv shaped alignments results suggest provide insights proportional increments missing characters immediately depending different lengths analysis goals
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Principle Coordinates Analysis (PCoA) projected onto 2 dimensions between pol-wgs mixtures and nFL genome, full dataset

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