<i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively).
<p>The “Variants overview” panel shows the twenty most frequent variants (STs) in each country, while the “AMR mechanism count over time” panel shows the number of genomes from the selected variant (ST258/ST11) by year and the number with (blue) and without (green) any carbapenem resistance me...
Αποθηκεύτηκε σε:
| Κύριος συγγραφέας: | |
|---|---|
| Άλλοι συγγραφείς: | , , , , , , , , , , , , , , , , , , |
| Έκδοση: |
2025
|
| Θέματα: | |
| Ετικέτες: |
Προσθήκη ετικέτας
Δεν υπάρχουν, Καταχωρήστε ετικέτα πρώτοι!
|
| _version_ | 1849927641851756544 |
|---|---|
| author | Sophia David (4172902) |
| author2 | Julio Diaz Caballero (22676621) Natacha Couto (6590267) Khalil Abudahab (10669917) Nabil-Fareed Alikhan (5066198) Corin Yeats (1565) Anthony Underwood (23932) Alison Molloy (22676624) Diana Connor (22676627) Heather M. Shane (22676630) Philip M. Ashton (4109527) Hajo Grundmann (51089) Matthew T.G. Holden (22676633) Edward J. Feil (7295681) Sonia B. Sia (22676636) Pilar Donado-Godoy (3709714) Ravikumar K. Lingegowda (22676639) Iruka N. Okeke (8088743) Silvia Argimón (282286) David M. Aanensen (7538114) |
| author2_role | author author author author author author author author author author author author author author author author author author author |
| author_facet | Sophia David (4172902) Julio Diaz Caballero (22676621) Natacha Couto (6590267) Khalil Abudahab (10669917) Nabil-Fareed Alikhan (5066198) Corin Yeats (1565) Anthony Underwood (23932) Alison Molloy (22676624) Diana Connor (22676627) Heather M. Shane (22676630) Philip M. Ashton (4109527) Hajo Grundmann (51089) Matthew T.G. Holden (22676633) Edward J. Feil (7295681) Sonia B. Sia (22676636) Pilar Donado-Godoy (3709714) Ravikumar K. Lingegowda (22676639) Iruka N. Okeke (8088743) Silvia Argimón (282286) David M. Aanensen (7538114) |
| author_role | author |
| dc.creator.none.fl_str_mv | Sophia David (4172902) Julio Diaz Caballero (22676621) Natacha Couto (6590267) Khalil Abudahab (10669917) Nabil-Fareed Alikhan (5066198) Corin Yeats (1565) Anthony Underwood (23932) Alison Molloy (22676624) Diana Connor (22676627) Heather M. Shane (22676630) Philip M. Ashton (4109527) Hajo Grundmann (51089) Matthew T.G. Holden (22676633) Edward J. Feil (7295681) Sonia B. Sia (22676636) Pilar Donado-Godoy (3709714) Ravikumar K. Lingegowda (22676639) Iruka N. Okeke (8088743) Silvia Argimón (282286) David M. Aanensen (7538114) |
| dc.date.none.fl_str_mv | 2025-11-24T18:31:31Z |
| dc.identifier.none.fl_str_mv | 10.1371/journal.pgph.0005256.g004 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/figure/_i_K_pneumoniae_i_genomes_represented_in_amr_watch_as_of_31_March_2025_from_the_USA_A_and_China_B_filtered_by_the_most_frequent_ST_from_each_country_ST258_and_ST11_respectively_/30697421 |
| dc.rights.none.fl_str_mv | CC BY 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified whole genome sequencing performed using community highly variable representation 31 march 2025 providing comparable data div >< p 700 pathogen genomes shared wgs data quality wgs data public wgs data platform included data integrating wgs data global genomics data watch platform incorporates watch enables users watch </ p watch </ genomic data wgs continues interactive platform information platform global efforts enables interrogation watch (< pathogen ’ pathogen populations visualises high vaccine development timely insights support research standard methods specific curation sampling information part due ongoing basis national levels growing volumes geotemporal information geotemporal distribution geographic regions genomic surveillance different species broad adoption bespoke species antimicrobial resistance |
| dc.title.none.fl_str_mv | <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively). |
| dc.type.none.fl_str_mv | Image Figure info:eu-repo/semantics/publishedVersion image |
| description | <p>The “Variants overview” panel shows the twenty most frequent variants (STs) in each country, while the “AMR mechanism count over time” panel shows the number of genomes from the selected variant (ST258/ST11) by year and the number with (blue) and without (green) any carbapenem resistance mechanisms. Updated visualisations with the same filters can be found at: <a href="https://amr.watch/organism/573?charts=1,0,0,1&Country+Code=US&ST=258" target="_blank">https://amr.watch/organism/573?charts=1,0,0,1&Country+Code=US&ST=258</a> and <a href="https://amr.watch/organism/573?charts=1,0,0,1&Country+Code=CN&ST=11" target="_blank">https://amr.watch/organism/573?charts=1,0,0,1&Country+Code=CN&ST=11</a>.</p> |
| eu_rights_str_mv | openAccess |
| id | Manara_6bc42bd454b71af668e62221295620fa |
| identifier_str_mv | 10.1371/journal.pgph.0005256.g004 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/30697421 |
| publishDate | 2025 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY 4.0 |
| spelling | <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively).Sophia David (4172902)Julio Diaz Caballero (22676621)Natacha Couto (6590267)Khalil Abudahab (10669917)Nabil-Fareed Alikhan (5066198)Corin Yeats (1565)Anthony Underwood (23932)Alison Molloy (22676624)Diana Connor (22676627)Heather M. Shane (22676630)Philip M. Ashton (4109527)Hajo Grundmann (51089)Matthew T.G. Holden (22676633)Edward J. Feil (7295681)Sonia B. Sia (22676636)Pilar Donado-Godoy (3709714)Ravikumar K. Lingegowda (22676639)Iruka N. Okeke (8088743)Silvia Argimón (282286)David M. Aanensen (7538114)Environmental Sciences not elsewhere classifiedBiological Sciences not elsewhere classifiedwhole genome sequencingperformed using communityhighly variable representation31 march 2025providing comparable datadiv >< p700 pathogen genomesshared wgs dataquality wgs datapublic wgs dataplatform included dataintegrating wgs dataglobal genomics datawatch platform incorporateswatch enables userswatch </ pwatch </genomic datawgs continuesinteractive platforminformation platformglobal effortsenables interrogationwatch (<pathogen ’pathogen populationsvisualises highvaccine developmenttimely insightssupport researchstandard methodsspecific curationsampling informationpart dueongoing basisnational levelsgrowing volumesgeotemporal informationgeotemporal distributiongeographic regionsgenomic surveillancedifferent speciesbroad adoptionbespoke speciesantimicrobial resistance<p>The “Variants overview” panel shows the twenty most frequent variants (STs) in each country, while the “AMR mechanism count over time” panel shows the number of genomes from the selected variant (ST258/ST11) by year and the number with (blue) and without (green) any carbapenem resistance mechanisms. Updated visualisations with the same filters can be found at: <a href="https://amr.watch/organism/573?charts=1,0,0,1&Country+Code=US&ST=258" target="_blank">https://amr.watch/organism/573?charts=1,0,0,1&Country+Code=US&ST=258</a> and <a href="https://amr.watch/organism/573?charts=1,0,0,1&Country+Code=CN&ST=11" target="_blank">https://amr.watch/organism/573?charts=1,0,0,1&Country+Code=CN&ST=11</a>.</p>2025-11-24T18:31:31ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1371/journal.pgph.0005256.g004https://figshare.com/articles/figure/_i_K_pneumoniae_i_genomes_represented_in_amr_watch_as_of_31_March_2025_from_the_USA_A_and_China_B_filtered_by_the_most_frequent_ST_from_each_country_ST258_and_ST11_respectively_/30697421CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/306974212025-11-24T18:31:31Z |
| spellingShingle | <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively). Sophia David (4172902) Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified whole genome sequencing performed using community highly variable representation 31 march 2025 providing comparable data div >< p 700 pathogen genomes shared wgs data quality wgs data public wgs data platform included data integrating wgs data global genomics data watch platform incorporates watch enables users watch </ p watch </ genomic data wgs continues interactive platform information platform global efforts enables interrogation watch (< pathogen ’ pathogen populations visualises high vaccine development timely insights support research standard methods specific curation sampling information part due ongoing basis national levels growing volumes geotemporal information geotemporal distribution geographic regions genomic surveillance different species broad adoption bespoke species antimicrobial resistance |
| status_str | publishedVersion |
| title | <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively). |
| title_full | <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively). |
| title_fullStr | <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively). |
| title_full_unstemmed | <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively). |
| title_short | <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively). |
| title_sort | <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively). |
| topic | Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified whole genome sequencing performed using community highly variable representation 31 march 2025 providing comparable data div >< p 700 pathogen genomes shared wgs data quality wgs data public wgs data platform included data integrating wgs data global genomics data watch platform incorporates watch enables users watch </ p watch </ genomic data wgs continues interactive platform information platform global efforts enables interrogation watch (< pathogen ’ pathogen populations visualises high vaccine development timely insights support research standard methods specific curation sampling information part due ongoing basis national levels growing volumes geotemporal information geotemporal distribution geographic regions genomic surveillance different species broad adoption bespoke species antimicrobial resistance |