Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.

<p>(a) The impact of number of proline residues on the average zipper propensity score. (b) Mean zipper propensity scores for proline-containing segments based on position of proline in the hexapeptide sequence.</p> <p>(TIF)</p>

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Príomhchruthaitheoir: Samantha Zink (22120627) (author)
Rannpháirtithe: Songrong Qu (22120630) (author), Thomas Holton (491084) (author), Eesha Shankar (22120633) (author), Paulina Stanley (22120636) (author), David S. Eisenberg (1325538) (author), Michael R. Sawaya (217747) (author), Jose A. Rodriguez (1982692) (author)
Foilsithe / Cruthaithe: 2025
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_version_ 1851483458403041280
author Samantha Zink (22120627)
author2 Songrong Qu (22120630)
Thomas Holton (491084)
Eesha Shankar (22120633)
Paulina Stanley (22120636)
David S. Eisenberg (1325538)
Michael R. Sawaya (217747)
Jose A. Rodriguez (1982692)
author2_role author
author
author
author
author
author
author
author_facet Samantha Zink (22120627)
Songrong Qu (22120630)
Thomas Holton (491084)
Eesha Shankar (22120633)
Paulina Stanley (22120636)
David S. Eisenberg (1325538)
Michael R. Sawaya (217747)
Jose A. Rodriguez (1982692)
author_role author
dc.creator.none.fl_str_mv Samantha Zink (22120627)
Songrong Qu (22120630)
Thomas Holton (491084)
Eesha Shankar (22120633)
Paulina Stanley (22120636)
David S. Eisenberg (1325538)
Michael R. Sawaya (217747)
Jose A. Rodriguez (1982692)
dc.date.none.fl_str_mv 2025-08-25T17:42:13Z
dc.identifier.none.fl_str_mv 10.1371/journal.pcbi.1013395.s015
dc.relation.none.fl_str_mv https://figshare.com/articles/figure/Average_zipper_propensity_score_as_calculated_by_Rosetta_from_1_563_proline-containing_segments_/29982487
dc.rights.none.fl_str_mv CC BY 4.0
info:eu-repo/semantics/openAccess
dc.subject.none.fl_str_mv Biophysics
Biochemistry
Molecular Biology
Pharmacology
Developmental Biology
Plant Biology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
Information Systems not elsewhere classified
xlink "> predicting
predictive model allows
predictions show enrichment
like structures remain
cell wall reorganization
amyloid formation across
zipper forming segments
steric zipper propensity
informed machine learning
machine learning
zipper profiles
peptide segments
amyloid fold
adopt amyloid
ten years
recent progress
rapid proteome
proteome level
proteins involved
potential category
new approach
facilitated structure
experimental characterization
designed sequences
based prediction
dc.title.none.fl_str_mv Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.
dc.type.none.fl_str_mv Image
Figure
info:eu-repo/semantics/publishedVersion
image
description <p>(a) The impact of number of proline residues on the average zipper propensity score. (b) Mean zipper propensity scores for proline-containing segments based on position of proline in the hexapeptide sequence.</p> <p>(TIF)</p>
eu_rights_str_mv openAccess
id Manara_6e28387b11b66d76b3dba635081b7da7
identifier_str_mv 10.1371/journal.pcbi.1013395.s015
network_acronym_str Manara
network_name_str ManaraRepo
oai_identifier_str oai:figshare.com:article/29982487
publishDate 2025
repository.mail.fl_str_mv
repository.name.fl_str_mv
repository_id_str
rights_invalid_str_mv CC BY 4.0
spelling Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.Samantha Zink (22120627)Songrong Qu (22120630)Thomas Holton (491084)Eesha Shankar (22120633)Paulina Stanley (22120636)David S. Eisenberg (1325538)Michael R. Sawaya (217747)Jose A. Rodriguez (1982692)BiophysicsBiochemistryMolecular BiologyPharmacologyDevelopmental BiologyPlant BiologyBiological Sciences not elsewhere classifiedMathematical Sciences not elsewhere classifiedChemical Sciences not elsewhere classifiedInformation Systems not elsewhere classifiedxlink "> predictingpredictive model allowspredictions show enrichmentlike structures remaincell wall reorganizationamyloid formation acrosszipper forming segmentssteric zipper propensityinformed machine learningmachine learningzipper profilespeptide segmentsamyloid foldadopt amyloidten yearsrecent progressrapid proteomeproteome levelproteins involvedpotential categorynew approachfacilitated structureexperimental characterizationdesigned sequencesbased prediction<p>(a) The impact of number of proline residues on the average zipper propensity score. (b) Mean zipper propensity scores for proline-containing segments based on position of proline in the hexapeptide sequence.</p> <p>(TIF)</p>2025-08-25T17:42:13ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1371/journal.pcbi.1013395.s015https://figshare.com/articles/figure/Average_zipper_propensity_score_as_calculated_by_Rosetta_from_1_563_proline-containing_segments_/29982487CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/299824872025-08-25T17:42:13Z
spellingShingle Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.
Samantha Zink (22120627)
Biophysics
Biochemistry
Molecular Biology
Pharmacology
Developmental Biology
Plant Biology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
Information Systems not elsewhere classified
xlink "> predicting
predictive model allows
predictions show enrichment
like structures remain
cell wall reorganization
amyloid formation across
zipper forming segments
steric zipper propensity
informed machine learning
machine learning
zipper profiles
peptide segments
amyloid fold
adopt amyloid
ten years
recent progress
rapid proteome
proteome level
proteins involved
potential category
new approach
facilitated structure
experimental characterization
designed sequences
based prediction
status_str publishedVersion
title Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.
title_full Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.
title_fullStr Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.
title_full_unstemmed Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.
title_short Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.
title_sort Average zipper propensity score as calculated by Rosetta from 1,563 proline-containing segments.
topic Biophysics
Biochemistry
Molecular Biology
Pharmacology
Developmental Biology
Plant Biology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
Information Systems not elsewhere classified
xlink "> predicting
predictive model allows
predictions show enrichment
like structures remain
cell wall reorganization
amyloid formation across
zipper forming segments
steric zipper propensity
informed machine learning
machine learning
zipper profiles
peptide segments
amyloid fold
adopt amyloid
ten years
recent progress
rapid proteome
proteome level
proteins involved
potential category
new approach
facilitated structure
experimental characterization
designed sequences
based prediction