Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2).
<p><b>(A)</b> PCA shows variance-stabilized gene expression data of 12 <i>S. fusiformis</i> samples from the kreisel tank system in spring 2021. Different symbol colors and shapes indicate different fertilization stages (diamond = fertilized, circle = unfertilized) and...
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2025
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| _version_ | 1851485246641405952 |
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| author | Svenja J. Müller (12880109) |
| author2 | Ilenia Urso (11844278) Sara Driscoll (21578756) Katharina Michael (8012699) Gabriele Sales (184799) Cristiano de Pittà (21578759) Wiebke Wessels (133866) Bettina Meyer (201867) |
| author2_role | author author author author author author author |
| author_facet | Svenja J. Müller (12880109) Ilenia Urso (11844278) Sara Driscoll (21578756) Katharina Michael (8012699) Gabriele Sales (184799) Cristiano de Pittà (21578759) Wiebke Wessels (133866) Bettina Meyer (201867) |
| author_role | author |
| dc.creator.none.fl_str_mv | Svenja J. Müller (12880109) Ilenia Urso (11844278) Sara Driscoll (21578756) Katharina Michael (8012699) Gabriele Sales (184799) Cristiano de Pittà (21578759) Wiebke Wessels (133866) Bettina Meyer (201867) |
| dc.date.none.fl_str_mv | 2025-06-20T17:43:05Z |
| dc.identifier.none.fl_str_mv | 10.1371/journal.pone.0326246.g004 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/figure/Differentially_expressed_genes_between_different_fertilization_stages_of_blastozooids_over_time_from_campaign_2_/29373839 |
| dc.rights.none.fl_str_mv | CC BY 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Cell Biology Genetics Molecular Biology Physiology Ecology Developmental Biology Cancer Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Information Systems not elsewhere classified specific difference among rising seawater temperatures potential reference genes physiology remain mysterious future qpcr applications facilitate molecular studies different developmental stages de novo </ temporally regulated reproductive potential reproductive period div >< p salpa fusiformis </ physiologically prepares blastozooids life cycle characteristics physiological processes involved salps </ p salpa </ life cycle processes involved physiological processes reproductive forms tunicates generally transcriptomic insights time matters salp blooms increasing importance important players global warming general form food webs fertilization status favorable conditions environmental change energy delivery ecosystem models distribution change cell communication biogeochemical cycles better assessment adequately assess |
| dc.title.none.fl_str_mv | Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2). |
| dc.type.none.fl_str_mv | Image Figure info:eu-repo/semantics/publishedVersion image |
| description | <p><b>(A)</b> PCA shows variance-stabilized gene expression data of 12 <i>S. fusiformis</i> samples from the kreisel tank system in spring 2021. Different symbol colors and shapes indicate different fertilization stages (diamond = fertilized, circle = unfertilized) and timepoints (light green = TP1, dark green = TP2). Identical point labels indicate individuals from the same chain (n = 3), i.e., clones. The explained variance [%] for PC1 and PC2 is also given. <b>(B)</b> Gene ontology terms (p < 0.05) enriched among differentially expressed genes between TP1 and TP2 in fertilized and unfertilized blastozooids. Numbers in circles indicate the absolute number of genes assigned to each GO term, while the x-axis indicates the percentage of all annotated DEGs within the respective comparison (fertilized: 1,789 DEG, 53.3% annotation; unfertilized: 1,427 DEG, 46.5% annotation).</p> |
| eu_rights_str_mv | openAccess |
| id | Manara_71e8045496884bc72e79c78b8d26c481 |
| identifier_str_mv | 10.1371/journal.pone.0326246.g004 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/29373839 |
| publishDate | 2025 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY 4.0 |
| spelling | Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2).Svenja J. Müller (12880109)Ilenia Urso (11844278)Sara Driscoll (21578756)Katharina Michael (8012699)Gabriele Sales (184799)Cristiano de Pittà (21578759)Wiebke Wessels (133866)Bettina Meyer (201867)Cell BiologyGeneticsMolecular BiologyPhysiologyEcologyDevelopmental BiologyCancerInorganic ChemistryEnvironmental Sciences not elsewhere classifiedBiological Sciences not elsewhere classifiedInformation Systems not elsewhere classifiedspecific difference amongrising seawater temperaturespotential reference genesphysiology remain mysteriousfuture qpcr applicationsfacilitate molecular studiesdifferent developmental stagesde novo </temporally regulated reproductivepotential reproductive perioddiv >< psalpa fusiformis </physiologically prepares blastozooidslife cycle characteristicsphysiological processes involvedsalps </ psalpa </life cycleprocesses involvedphysiological processesreproductive formstunicates generallytranscriptomic insightstime matterssalp bloomsincreasing importanceimportant playersglobal warminggeneral formfood websfertilization statusfavorable conditionsenvironmental changeenergy deliveryecosystem modelsdistribution changecell communicationbiogeochemical cyclesbetter assessmentadequately assess<p><b>(A)</b> PCA shows variance-stabilized gene expression data of 12 <i>S. fusiformis</i> samples from the kreisel tank system in spring 2021. Different symbol colors and shapes indicate different fertilization stages (diamond = fertilized, circle = unfertilized) and timepoints (light green = TP1, dark green = TP2). Identical point labels indicate individuals from the same chain (n = 3), i.e., clones. The explained variance [%] for PC1 and PC2 is also given. <b>(B)</b> Gene ontology terms (p < 0.05) enriched among differentially expressed genes between TP1 and TP2 in fertilized and unfertilized blastozooids. Numbers in circles indicate the absolute number of genes assigned to each GO term, while the x-axis indicates the percentage of all annotated DEGs within the respective comparison (fertilized: 1,789 DEG, 53.3% annotation; unfertilized: 1,427 DEG, 46.5% annotation).</p>2025-06-20T17:43:05ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1371/journal.pone.0326246.g004https://figshare.com/articles/figure/Differentially_expressed_genes_between_different_fertilization_stages_of_blastozooids_over_time_from_campaign_2_/29373839CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/293738392025-06-20T17:43:05Z |
| spellingShingle | Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2). Svenja J. Müller (12880109) Cell Biology Genetics Molecular Biology Physiology Ecology Developmental Biology Cancer Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Information Systems not elsewhere classified specific difference among rising seawater temperatures potential reference genes physiology remain mysterious future qpcr applications facilitate molecular studies different developmental stages de novo </ temporally regulated reproductive potential reproductive period div >< p salpa fusiformis </ physiologically prepares blastozooids life cycle characteristics physiological processes involved salps </ p salpa </ life cycle processes involved physiological processes reproductive forms tunicates generally transcriptomic insights time matters salp blooms increasing importance important players global warming general form food webs fertilization status favorable conditions environmental change energy delivery ecosystem models distribution change cell communication biogeochemical cycles better assessment adequately assess |
| status_str | publishedVersion |
| title | Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2). |
| title_full | Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2). |
| title_fullStr | Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2). |
| title_full_unstemmed | Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2). |
| title_short | Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2). |
| title_sort | Differentially expressed genes between different fertilization stages of blastozooids over time from campaign (2). |
| topic | Cell Biology Genetics Molecular Biology Physiology Ecology Developmental Biology Cancer Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Information Systems not elsewhere classified specific difference among rising seawater temperatures potential reference genes physiology remain mysterious future qpcr applications facilitate molecular studies different developmental stages de novo </ temporally regulated reproductive potential reproductive period div >< p salpa fusiformis </ physiologically prepares blastozooids life cycle characteristics physiological processes involved salps </ p salpa </ life cycle processes involved physiological processes reproductive forms tunicates generally transcriptomic insights time matters salp blooms increasing importance important players global warming general form food webs fertilization status favorable conditions environmental change energy delivery ecosystem models distribution change cell communication biogeochemical cycles better assessment adequately assess |