Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in Glioblastoma

<p>Extended Data relating to Main Figure 2/Assessment of ALDH1A1+ cells from primary, treatment-naive glioblastoma. A, Bar plot shows ALDH-bright (ALDHbr) vital cells from two additional paired cases of naive vs. experimental (TMZ→eR) and clinical (cR) relapse. Data as mean ± SD. p values by o...

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1. autor: Sied Kebir (15048732) (author)
Kolejni autorzy: Vivien Ullrich (15048735) (author), Pia Berger (15048738) (author), Celia Dobersalske (15048741) (author), Sarah Langer (15048744) (author), Laurèl Rauschenbach (15048747) (author), Daniel Trageser (15048750) (author), Andreas Till (15048753) (author), Franziska K. Lorbeer (15048756) (author), Anja Wieland (15048759) (author), Timo Wilhelm-Buchstab (15048762) (author), Ashar Ahmad (15048765) (author), Holger Fröhlich (8724576) (author), Igor Cima (15048768) (author), Shruthi Prasad (15048771) (author), Johann Matschke (15048774) (author), Verena Jendrossek (15048777) (author), Marc Remke (14962619) (author), Barbara M. Grüner (14947089) (author), Alexander Roesch (15048780) (author), Jens T. Siveke (11780911) (author), Christel Herold-Mende (15047946) (author), Tobias Blau (15048783) (author), Kathy Keyvani (15048786) (author), Frank K.H. van Landeghem (15048789) (author), Torsten Pietsch (15048792) (author), Jörg Felsberg (15048795) (author), Guido Reifenberger (12335398) (author), Michael Weller (15037908) (author), Ulrich Sure (15048798) (author), Oliver Brüstle (15048801) (author), Matthias Simon (15048804) (author), Martin Glas (15048807) (author), Björn Scheffler (15048810) (author)
Wydane: 2025
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_version_ 1849927634127945728
author Sied Kebir (15048732)
author2 Vivien Ullrich (15048735)
Pia Berger (15048738)
Celia Dobersalske (15048741)
Sarah Langer (15048744)
Laurèl Rauschenbach (15048747)
Daniel Trageser (15048750)
Andreas Till (15048753)
Franziska K. Lorbeer (15048756)
Anja Wieland (15048759)
Timo Wilhelm-Buchstab (15048762)
Ashar Ahmad (15048765)
Holger Fröhlich (8724576)
Igor Cima (15048768)
Shruthi Prasad (15048771)
Johann Matschke (15048774)
Verena Jendrossek (15048777)
Marc Remke (14962619)
Barbara M. Grüner (14947089)
Alexander Roesch (15048780)
Jens T. Siveke (11780911)
Christel Herold-Mende (15047946)
Tobias Blau (15048783)
Kathy Keyvani (15048786)
Frank K.H. van Landeghem (15048789)
Torsten Pietsch (15048792)
Jörg Felsberg (15048795)
Guido Reifenberger (12335398)
Michael Weller (15037908)
Ulrich Sure (15048798)
Oliver Brüstle (15048801)
Matthias Simon (15048804)
Martin Glas (15048807)
Björn Scheffler (15048810)
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author_facet Sied Kebir (15048732)
Vivien Ullrich (15048735)
Pia Berger (15048738)
Celia Dobersalske (15048741)
Sarah Langer (15048744)
Laurèl Rauschenbach (15048747)
Daniel Trageser (15048750)
Andreas Till (15048753)
Franziska K. Lorbeer (15048756)
Anja Wieland (15048759)
Timo Wilhelm-Buchstab (15048762)
Ashar Ahmad (15048765)
Holger Fröhlich (8724576)
Igor Cima (15048768)
Shruthi Prasad (15048771)
Johann Matschke (15048774)
Verena Jendrossek (15048777)
Marc Remke (14962619)
Barbara M. Grüner (14947089)
Alexander Roesch (15048780)
Jens T. Siveke (11780911)
Christel Herold-Mende (15047946)
Tobias Blau (15048783)
Kathy Keyvani (15048786)
Frank K.H. van Landeghem (15048789)
Torsten Pietsch (15048792)
Jörg Felsberg (15048795)
Guido Reifenberger (12335398)
Michael Weller (15037908)
Ulrich Sure (15048798)
Oliver Brüstle (15048801)
Matthias Simon (15048804)
Martin Glas (15048807)
Björn Scheffler (15048810)
author_role author
dc.creator.none.fl_str_mv Sied Kebir (15048732)
Vivien Ullrich (15048735)
Pia Berger (15048738)
Celia Dobersalske (15048741)
Sarah Langer (15048744)
Laurèl Rauschenbach (15048747)
Daniel Trageser (15048750)
Andreas Till (15048753)
Franziska K. Lorbeer (15048756)
Anja Wieland (15048759)
Timo Wilhelm-Buchstab (15048762)
Ashar Ahmad (15048765)
Holger Fröhlich (8724576)
Igor Cima (15048768)
Shruthi Prasad (15048771)
Johann Matschke (15048774)
Verena Jendrossek (15048777)
Marc Remke (14962619)
Barbara M. Grüner (14947089)
Alexander Roesch (15048780)
Jens T. Siveke (11780911)
Christel Herold-Mende (15047946)
Tobias Blau (15048783)
Kathy Keyvani (15048786)
Frank K.H. van Landeghem (15048789)
Torsten Pietsch (15048792)
Jörg Felsberg (15048795)
Guido Reifenberger (12335398)
Michael Weller (15037908)
Ulrich Sure (15048798)
Oliver Brüstle (15048801)
Matthias Simon (15048804)
Martin Glas (15048807)
Björn Scheffler (15048810)
dc.date.none.fl_str_mv 2025-11-25T12:46:38Z
dc.identifier.none.fl_str_mv 10.1158/1078-0432.30706284
dc.relation.none.fl_str_mv https://figshare.com/articles/figure/Supplementary_Figure_S2_from_A_Sequential_Targeting_Strategy_Interrupts_AKT-Driven_Subclone-Mediated_Progression_in_Glioblastoma/30706284
dc.rights.none.fl_str_mv CC BY
info:eu-repo/semantics/openAccess
dc.subject.none.fl_str_mv Cancer
Therapeutic Research and Development
Clinical Research and Trials
CNS Cancers
Gliomas, Glioblastomas
Drug Targets
Precision Medicine
dc.title.none.fl_str_mv Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in Glioblastoma
dc.type.none.fl_str_mv Image
Figure
info:eu-repo/semantics/publishedVersion
image
description <p>Extended Data relating to Main Figure 2/Assessment of ALDH1A1+ cells from primary, treatment-naive glioblastoma. A, Bar plot shows ALDH-bright (ALDHbr) vital cells from two additional paired cases of naive vs. experimental (TMZ→eR) and clinical (cR) relapse. Data as mean ± SD. p values by one-way analysis of variance (ANOVA) with Tukey´s post-hoc test. B, Dotplot shows ALDH1A1 mean fluorescence intensity (MFI) in paired BN46 treatment-naive vs. experimental relapse conditions (in vitro exposure to TMZ (TMZ→eR) or irradiation (RT→eR)). Data are normalized to isotype control, mean ± SD. p values calculated by Kruskal-Wallis test with Dunn's post-hoc test. C, Relative ALDH1A1 expression in -knockdown (shALDH1A1) and -overexpression (Ovx) BN46 cells used for indicated experiment. Data shown as mean ± SD, normalized to their respective controls (ALDH1A1 Ovx to GFP Ctrl | shALDH1A1 to shNT Ctrl). D, Left: Brightfield image of BN46 cells in 96-well plates during monitoring by software-based cell recognition in the limiting dilution assay (NyOne®). An exemplary single cell/well is shown at one day post seeding; representative monoclonal colonies of ALDH1A1-knockdown (sh) and -overexpressing (Ovx) cells at day 16 after seeding. Right: Doubling time estimated at day 16 after seeding (see Methods). Data as mean ± SD, p values calculated by Kruskal-Wallis test with Dunn's post-hoc test. E, Left: Cartoon describes the neurosphere experiments shown in Fig. 2H. Right: Phase contrast microscopic appearance of plated 2° neurosphere and respective immunofluorescence visualization of antibody labeling on neurosphere-derived cells. Neuronal phenotype, β3-tubulin (β3-tub); glial phenotypes, glial fibrillary acidic protein (GFAP). Nuclei exposed with DAPI. Scale bars: left: 100 µM, right: 50 µM. F, Table showing quantification data of 1° and 2° neurosphere generations from (E) in the respective treatment-naive BN46 cells. G, All plated 2° neurospheres from assay (E,F) generated neuronal and glial cell phenotypes.</p>
eu_rights_str_mv openAccess
id Manara_725a8ab1c4a71c0e878ed86b2090902b
identifier_str_mv 10.1158/1078-0432.30706284
network_acronym_str Manara
network_name_str ManaraRepo
oai_identifier_str oai:figshare.com:article/30706284
publishDate 2025
repository.mail.fl_str_mv
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rights_invalid_str_mv CC BY
spelling Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in GlioblastomaSied Kebir (15048732)Vivien Ullrich (15048735)Pia Berger (15048738)Celia Dobersalske (15048741)Sarah Langer (15048744)Laurèl Rauschenbach (15048747)Daniel Trageser (15048750)Andreas Till (15048753)Franziska K. Lorbeer (15048756)Anja Wieland (15048759)Timo Wilhelm-Buchstab (15048762)Ashar Ahmad (15048765)Holger Fröhlich (8724576)Igor Cima (15048768)Shruthi Prasad (15048771)Johann Matschke (15048774)Verena Jendrossek (15048777)Marc Remke (14962619)Barbara M. Grüner (14947089)Alexander Roesch (15048780)Jens T. Siveke (11780911)Christel Herold-Mende (15047946)Tobias Blau (15048783)Kathy Keyvani (15048786)Frank K.H. van Landeghem (15048789)Torsten Pietsch (15048792)Jörg Felsberg (15048795)Guido Reifenberger (12335398)Michael Weller (15037908)Ulrich Sure (15048798)Oliver Brüstle (15048801)Matthias Simon (15048804)Martin Glas (15048807)Björn Scheffler (15048810)CancerTherapeutic Research and DevelopmentClinical Research and TrialsCNS CancersGliomas, GlioblastomasDrug TargetsPrecision Medicine<p>Extended Data relating to Main Figure 2/Assessment of ALDH1A1+ cells from primary, treatment-naive glioblastoma. A, Bar plot shows ALDH-bright (ALDHbr) vital cells from two additional paired cases of naive vs. experimental (TMZ→eR) and clinical (cR) relapse. Data as mean ± SD. p values by one-way analysis of variance (ANOVA) with Tukey´s post-hoc test. B, Dotplot shows ALDH1A1 mean fluorescence intensity (MFI) in paired BN46 treatment-naive vs. experimental relapse conditions (in vitro exposure to TMZ (TMZ→eR) or irradiation (RT→eR)). Data are normalized to isotype control, mean ± SD. p values calculated by Kruskal-Wallis test with Dunn's post-hoc test. C, Relative ALDH1A1 expression in -knockdown (shALDH1A1) and -overexpression (Ovx) BN46 cells used for indicated experiment. Data shown as mean ± SD, normalized to their respective controls (ALDH1A1 Ovx to GFP Ctrl | shALDH1A1 to shNT Ctrl). D, Left: Brightfield image of BN46 cells in 96-well plates during monitoring by software-based cell recognition in the limiting dilution assay (NyOne®). An exemplary single cell/well is shown at one day post seeding; representative monoclonal colonies of ALDH1A1-knockdown (sh) and -overexpressing (Ovx) cells at day 16 after seeding. Right: Doubling time estimated at day 16 after seeding (see Methods). Data as mean ± SD, p values calculated by Kruskal-Wallis test with Dunn's post-hoc test. E, Left: Cartoon describes the neurosphere experiments shown in Fig. 2H. Right: Phase contrast microscopic appearance of plated 2° neurosphere and respective immunofluorescence visualization of antibody labeling on neurosphere-derived cells. Neuronal phenotype, β3-tubulin (β3-tub); glial phenotypes, glial fibrillary acidic protein (GFAP). Nuclei exposed with DAPI. Scale bars: left: 100 µM, right: 50 µM. F, Table showing quantification data of 1° and 2° neurosphere generations from (E) in the respective treatment-naive BN46 cells. G, All plated 2° neurospheres from assay (E,F) generated neuronal and glial cell phenotypes.</p>2025-11-25T12:46:38ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1158/1078-0432.30706284https://figshare.com/articles/figure/Supplementary_Figure_S2_from_A_Sequential_Targeting_Strategy_Interrupts_AKT-Driven_Subclone-Mediated_Progression_in_Glioblastoma/30706284CC BYinfo:eu-repo/semantics/openAccessoai:figshare.com:article/307062842025-11-25T12:46:38Z
spellingShingle Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in Glioblastoma
Sied Kebir (15048732)
Cancer
Therapeutic Research and Development
Clinical Research and Trials
CNS Cancers
Gliomas, Glioblastomas
Drug Targets
Precision Medicine
status_str publishedVersion
title Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in Glioblastoma
title_full Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in Glioblastoma
title_fullStr Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in Glioblastoma
title_full_unstemmed Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in Glioblastoma
title_short Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in Glioblastoma
title_sort Supplementary Figure S2 from A Sequential Targeting Strategy Interrupts AKT-Driven Subclone-Mediated Progression in Glioblastoma
topic Cancer
Therapeutic Research and Development
Clinical Research and Trials
CNS Cancers
Gliomas, Glioblastomas
Drug Targets
Precision Medicine