Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticles
<p>Titanium dioxide nanoparticles (TiO<sub>2</sub>NPs) are relevant nanomaterials (NMs) for biomedicine and industry, which raise concerns about its effects on human health, particularly through ingestion. Several studies found that exposure to NMs can lead to DNA methylation chang...
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| Үндсэн зохиолч: | |
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| Бусад зохиолчид: | , , , , , |
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2025
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Шошго нэмэх
Шошго байхгүй, Энэхүү баримтыг шошголох эхний хүн болох!
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| _version_ | 1849927630036402176 |
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| author | Célia Ventura (8440917) |
| author2 | Ana Valente (12585734) Luís Vieira (774793) Catarina Silva (807184) Dora Rolo (311728) Maria João Silva (8440929) Henriqueta Louro (10922661) |
| author2_role | author author author author author author |
| author_facet | Célia Ventura (8440917) Ana Valente (12585734) Luís Vieira (774793) Catarina Silva (807184) Dora Rolo (311728) Maria João Silva (8440929) Henriqueta Louro (10922661) |
| author_role | author |
| dc.creator.none.fl_str_mv | Célia Ventura (8440917) Ana Valente (12585734) Luís Vieira (774793) Catarina Silva (807184) Dora Rolo (311728) Maria João Silva (8440929) Henriqueta Louro (10922661) |
| dc.date.none.fl_str_mv | 2025-11-25T18:20:06Z |
| dc.identifier.none.fl_str_mv | 10.6084/m9.figshare.30713092.v1 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/dataset/Genome-wide_methylation_changes_upon_Caco-2_cells_exposure_to_undigested_and_digested_titanium_dioxide_nanoparticles/30713092 |
| dc.rights.none.fl_str_mv | CC BY 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Medicine Cell Biology Genetics Molecular Biology Cancer Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified DNA methylation Gene Ontology nanomaterials pathway analysis simulated digestion |
| dc.title.none.fl_str_mv | Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticles |
| dc.type.none.fl_str_mv | Dataset info:eu-repo/semantics/publishedVersion dataset |
| description | <p>Titanium dioxide nanoparticles (TiO<sub>2</sub>NPs) are relevant nanomaterials (NMs) for biomedicine and industry, which raise concerns about its effects on human health, particularly through ingestion. Several studies found that exposure to NMs can lead to DNA methylation changes. DNA methylation regulates gene expression, playing a vital role in development and disease, with aberrant methylation linked to cancer and other health conditions.</p> <p>We aimed at identifying DNA methylation changes in intestinal cells exposed to three TiO<sub>2</sub>NPs (NM-102, NM-103, NM-105), either digested or undigested. Their cellular effects were investigated by functional pathway and gene ontology (GO) analysis.</p> <p>48, 41, 55 differentially methylated genes (DMG) were identified after exposure to undigested NM-102, NM-103, NM-105; 71, 65, 55 DMG in the digested counterparts. Undigested TiO<sub>2</sub>NPs affected many G-proteins/adenylate cyclase-related pathways (PKA, glucagon, GPER1, CREB1, ADORA2B); the digested had lower impact. Cancer-related pathways were shared. Enriched molecular functions were mainly transcription-related; different biological processes were enriched if TiO<sub>2</sub>NPs were digested or not.</p> <p>TiO<sub>2</sub>NPs exposure causes DNA methylation changes that have a functional impact on intestinal cells, which differs with its physicochemical properties and digestion. NM-105 caused hypermethylation, unlike the other TiO<sub>2</sub>NPs. This study highlights DNA methylation relevance in assessing NMs’ toxicity.</p> <p>Titanium dioxide nanoparticles (TiO<sub>2</sub>NP) are widely present in our daily lives, including in food as a white pigment to make it better-looking and appealing. Although there are many toxicological studies on TiO<sub>2</sub>NP, few have focused on its effects on DNA methylation, which is a mechanism for regulating gene expression, and consequently, cellular functions. In this study, human intestinal cells were exposed to three different types of TiO<sub>2</sub>NP, before and after simulated digestion. Our results indicate that the physical-chemical characteristics of TiO<sub>2</sub>NP influence its effects and demonstrate the impact of digestion, relevant in the context of oral exposure. Moreover, they highlight the biological impact of TiO<sub>2</sub>NP on intestinal cells through DNA methylation changes and, consequently, the relevance of studying these changes when assessing the adverse effects of nanomaterials on human health.</p> |
| eu_rights_str_mv | openAccess |
| id | Manara_86208aaa6ae0ad9046d27a5c0b01d40c |
| identifier_str_mv | 10.6084/m9.figshare.30713092.v1 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/30713092 |
| publishDate | 2025 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY 4.0 |
| spelling | Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticlesCélia Ventura (8440917)Ana Valente (12585734)Luís Vieira (774793)Catarina Silva (807184)Dora Rolo (311728)Maria João Silva (8440929)Henriqueta Louro (10922661)MedicineCell BiologyGeneticsMolecular BiologyCancerBiological Sciences not elsewhere classifiedChemical Sciences not elsewhere classifiedDNA methylationGene Ontologynanomaterialspathway analysissimulated digestion<p>Titanium dioxide nanoparticles (TiO<sub>2</sub>NPs) are relevant nanomaterials (NMs) for biomedicine and industry, which raise concerns about its effects on human health, particularly through ingestion. Several studies found that exposure to NMs can lead to DNA methylation changes. DNA methylation regulates gene expression, playing a vital role in development and disease, with aberrant methylation linked to cancer and other health conditions.</p> <p>We aimed at identifying DNA methylation changes in intestinal cells exposed to three TiO<sub>2</sub>NPs (NM-102, NM-103, NM-105), either digested or undigested. Their cellular effects were investigated by functional pathway and gene ontology (GO) analysis.</p> <p>48, 41, 55 differentially methylated genes (DMG) were identified after exposure to undigested NM-102, NM-103, NM-105; 71, 65, 55 DMG in the digested counterparts. Undigested TiO<sub>2</sub>NPs affected many G-proteins/adenylate cyclase-related pathways (PKA, glucagon, GPER1, CREB1, ADORA2B); the digested had lower impact. Cancer-related pathways were shared. Enriched molecular functions were mainly transcription-related; different biological processes were enriched if TiO<sub>2</sub>NPs were digested or not.</p> <p>TiO<sub>2</sub>NPs exposure causes DNA methylation changes that have a functional impact on intestinal cells, which differs with its physicochemical properties and digestion. NM-105 caused hypermethylation, unlike the other TiO<sub>2</sub>NPs. This study highlights DNA methylation relevance in assessing NMs’ toxicity.</p> <p>Titanium dioxide nanoparticles (TiO<sub>2</sub>NP) are widely present in our daily lives, including in food as a white pigment to make it better-looking and appealing. Although there are many toxicological studies on TiO<sub>2</sub>NP, few have focused on its effects on DNA methylation, which is a mechanism for regulating gene expression, and consequently, cellular functions. In this study, human intestinal cells were exposed to three different types of TiO<sub>2</sub>NP, before and after simulated digestion. Our results indicate that the physical-chemical characteristics of TiO<sub>2</sub>NP influence its effects and demonstrate the impact of digestion, relevant in the context of oral exposure. Moreover, they highlight the biological impact of TiO<sub>2</sub>NP on intestinal cells through DNA methylation changes and, consequently, the relevance of studying these changes when assessing the adverse effects of nanomaterials on human health.</p>2025-11-25T18:20:06ZDatasetinfo:eu-repo/semantics/publishedVersiondataset10.6084/m9.figshare.30713092.v1https://figshare.com/articles/dataset/Genome-wide_methylation_changes_upon_Caco-2_cells_exposure_to_undigested_and_digested_titanium_dioxide_nanoparticles/30713092CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/307130922025-11-25T18:20:06Z |
| spellingShingle | Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticles Célia Ventura (8440917) Medicine Cell Biology Genetics Molecular Biology Cancer Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified DNA methylation Gene Ontology nanomaterials pathway analysis simulated digestion |
| status_str | publishedVersion |
| title | Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticles |
| title_full | Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticles |
| title_fullStr | Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticles |
| title_full_unstemmed | Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticles |
| title_short | Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticles |
| title_sort | Genome-wide methylation changes upon Caco-2 cells exposure to undigested and digested titanium dioxide nanoparticles |
| topic | Medicine Cell Biology Genetics Molecular Biology Cancer Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified DNA methylation Gene Ontology nanomaterials pathway analysis simulated digestion |