Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å.
<p>Green rectangles indicate region populated in all <i>Bound</i> model replicas. Top to bottom panels correspond to either replicas 1–3 (<i>Bound</i> and <i>Sep</i> models) or 1–4 (<i>Surface</i> model).</p> <p>(TIFF)</p>
Furkejuvvon:
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| Eará dahkkit: | , |
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2025
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| _version_ | 1849927626901159936 |
|---|---|
| author | Oluwatoyin Campbell (14392137) |
| author2 | Dina Dahhan (22683620) Viviana Monje (2056069) |
| author2_role | author author |
| author_facet | Oluwatoyin Campbell (14392137) Dina Dahhan (22683620) Viviana Monje (2056069) |
| author_role | author |
| dc.creator.none.fl_str_mv | Oluwatoyin Campbell (14392137) Dina Dahhan (22683620) Viviana Monje (2056069) |
| dc.date.none.fl_str_mv | 2025-11-25T18:38:38Z |
| dc.identifier.none.fl_str_mv | 10.1371/journal.pcbi.1013736.s009 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/figure/Contact_maps_of_residues_during_the_last_half_of_trajectory_200_ns_in_i_Sep_i_and_500_ns_in_i_Surface_i_model_based_on_a_cutoff_of_14_/30714665 |
| dc.rights.none.fl_str_mv | CC BY 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Biophysics Biochemistry Cell Biology Genetics Molecular Biology Biotechnology Cancer Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified Physical Sciences not elsewhere classified Information Systems not elsewhere classified process may help complex transmembrane topology comparing dimer interactions aqueous solution versus promote p7 oligomerization protein residue alignment p7 dimers driven alignment underlie health study demonstrates particularly involving often composed molecular mechanisms key residues hydrophobic contacts hydrogen bonding first helix explain assembly dynamic contributors channel assembly |
| dc.title.none.fl_str_mv | Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å. |
| dc.type.none.fl_str_mv | Image Figure info:eu-repo/semantics/publishedVersion image |
| description | <p>Green rectangles indicate region populated in all <i>Bound</i> model replicas. Top to bottom panels correspond to either replicas 1–3 (<i>Bound</i> and <i>Sep</i> models) or 1–4 (<i>Surface</i> model).</p> <p>(TIFF)</p> |
| eu_rights_str_mv | openAccess |
| id | Manara_8af7ccf6b707342857457935cf74f43f |
| identifier_str_mv | 10.1371/journal.pcbi.1013736.s009 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/30714665 |
| publishDate | 2025 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY 4.0 |
| spelling | Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å.Oluwatoyin Campbell (14392137)Dina Dahhan (22683620)Viviana Monje (2056069)BiophysicsBiochemistryCell BiologyGeneticsMolecular BiologyBiotechnologyCancerBiological Sciences not elsewhere classifiedChemical Sciences not elsewhere classifiedPhysical Sciences not elsewhere classifiedInformation Systems not elsewhere classifiedprocess may helpcomplex transmembrane topologycomparing dimer interactionsaqueous solution versuspromote p7 oligomerizationprotein residue alignmentp7 dimersdriven alignmentunderlie healthstudy demonstratesparticularly involvingoften composedmolecular mechanismskey residueshydrophobic contactshydrogen bondingfirst helixexplain assemblydynamic contributorschannel assembly<p>Green rectangles indicate region populated in all <i>Bound</i> model replicas. Top to bottom panels correspond to either replicas 1–3 (<i>Bound</i> and <i>Sep</i> models) or 1–4 (<i>Surface</i> model).</p> <p>(TIFF)</p>2025-11-25T18:38:38ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1371/journal.pcbi.1013736.s009https://figshare.com/articles/figure/Contact_maps_of_residues_during_the_last_half_of_trajectory_200_ns_in_i_Sep_i_and_500_ns_in_i_Surface_i_model_based_on_a_cutoff_of_14_/30714665CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/307146652025-11-25T18:38:38Z |
| spellingShingle | Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å. Oluwatoyin Campbell (14392137) Biophysics Biochemistry Cell Biology Genetics Molecular Biology Biotechnology Cancer Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified Physical Sciences not elsewhere classified Information Systems not elsewhere classified process may help complex transmembrane topology comparing dimer interactions aqueous solution versus promote p7 oligomerization protein residue alignment p7 dimers driven alignment underlie health study demonstrates particularly involving often composed molecular mechanisms key residues hydrophobic contacts hydrogen bonding first helix explain assembly dynamic contributors channel assembly |
| status_str | publishedVersion |
| title | Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å. |
| title_full | Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å. |
| title_fullStr | Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å. |
| title_full_unstemmed | Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å. |
| title_short | Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å. |
| title_sort | Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å. |
| topic | Biophysics Biochemistry Cell Biology Genetics Molecular Biology Biotechnology Cancer Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified Physical Sciences not elsewhere classified Information Systems not elsewhere classified process may help complex transmembrane topology comparing dimer interactions aqueous solution versus promote p7 oligomerization protein residue alignment p7 dimers driven alignment underlie health study demonstrates particularly involving often composed molecular mechanisms key residues hydrophobic contacts hydrogen bonding first helix explain assembly dynamic contributors channel assembly |