A reproducible set of CAPs in the whole-brain rs-fMRI involve recurring mixed representations of canonical resting-state networks.

<p><b>(A)</b> Analysis overview. In each permutation, 337 subjects are randomly split into 2 equal-sized groups. Within each split, a parcel-by-time array of rs-fMRI data is temporally concatenated across subjects. Time frames are clustered based on spatial similarity using K-means...

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Main Author: Kangjoo Lee (11648345) (author)
Other Authors: Jie Lisa Ji (15185101) (author), Clara Fonteneau (15185104) (author), Lucie Berkovitch (12465474) (author), Masih Rahmati (11058274) (author), Lining Pan (15185110) (author), Grega Repovš (8731717) (author), John H. Krystal (9699559) (author), John D. Murray (10292226) (author), Alan Anticevic (3540146) (author)
Published: 2024
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Summary:<p><b>(A)</b> Analysis overview. In each permutation, 337 subjects are randomly split into 2 equal-sized groups. Within each split, a parcel-by-time array of rs-fMRI data is temporally concatenated across subjects. Time frames are clustered based on spatial similarity using K-means clustering. The number of clusters (<i>k</i>) is estimated for each split. Each CAP is obtained as the centroid of each cluster (<b><a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3002808#pbio.3002808.s001" target="_blank">S1 Fig</a></b>). <b>(B)</b> Individual’s statistical preference toward a specific number of CAPs (<i>k</i>) is reproducible. In each split, an individual’s preference toward a specific number was quantified using the number of permutations that resulted in a specific solution (e.g., 4 CAPs or 5 CAPs) across 1,000 permutations. Specifically, we compute the difference (occurrence of <i>k</i> = 5)—(occurrence of <i>k</i> = 4) for each subject (<b>Methods</b>). <b>(C)</b> Spatial correlation of the 5-CAP basis set (left) and between the 4-CAP basis set and the 5-CAP basis set (right). <i>r</i> values were rounded to the nearest 2 decimal digits. <b>(D)</b> CAB-NP [<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3002808#pbio.3002808.ref046" target="_blank">46</a>]. <b>(E)</b> Spatial topography of 5 basis CAPs. <b>(F)</b> Spatial similarity of the 5 basis CAPs to canonical resting-state networks, predefined using the CAB-NP parcellation in (<b>D</b>). CAB-NP, Cole-Anticevic Brain Network Parcellation; CAP, co-activation pattern; rs-fMRI, resting state functional Magnetic Resonance Imaging.</p>