List of randomly generated 9–11 amino acid peptides used for benchmarking NetMHCpan.

List of randomly generated 9–11 amino acid peptides used for benchmarking NetMHCpan.

<p>List of randomly generated 9–11 amino acid peptides used for benchmarking NetMHCpan.</p>

محفوظ في:

التفاصيل البيبلوغرافية
المؤلف الرئيسي:	Queenie W. T. Chan (8976299) (author)
مؤلفون آخرون:	Teesha C. Baker (22311390) (author), Chia-Wei Kuan (22311393) (author), Lucy Song (22311396) (author), Hongbing Yu (700447) (author), Leonard J. Foster (23896) (author)
منشور في:	2025
الموضوعات:	Cell Biology Genetics Molecular Biology Biotechnology Evolutionary Biology Immunology Cancer Infectious Diseases Virology seven consanguineous b mild acid elution larger sample sizes identify mhc epitopes identify candidate antigens find binding motifs originating hla alleles induce immune protection promising data generated generated data immune response hla haplotypes xlink "> wide array target population specific contaminants significant portion partially deconvoluted minimize non may help findings suggest derived immunopeptidomes clinical trials cell lines approach demonstrated approach could
الوسوم:	إضافة وسم لا توجد وسوم, كن أول من يضع وسما على هذه التسجيلة!

مواد مشابهة

Benchmarking MHC epitopes from combined cell analysis with NetMHCpan or NetMHCIIpan.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Benchmarking MHC epitopes from individual cell analyses with NetMHCpan or NetMHCIIpan.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

List of randomly generated 12–20 amino acid peptides used for benchmarking NetMHCIIpan.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Benchmarking epitope sequences derived from peptide data.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Effects of adding more cell lines to the epitope clustering approach.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Different ways to display a sequence logo.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Deriving HLA allele-specific consensus sequences from MAE-derived peptide data.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Strategy for analyzing consanguineous cell lines.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

HLA genetic relatedness of B-lymphocytes from a seven-member donor family.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Using MAE to isolate MHC I and MHC II ligands.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Cell lines added to the epitope clustering approach, in the order shown in this table, improves allele deconvolution as shown in Fig 7.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Example of multiple sequence alignment of an epitope from the MHC II group and aligned with no gap openings to a maximum allowable length of 30 residues.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Example of multiple sequence alignment of an epitope from the MHC I and aligned with no gap openings and a maximum allowable length of 12 residues.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Haplotype data for the WT (LBL-721) and MHC-mutant (LBL-721–174) cell lines.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Log2 fold change values of the six HLA alleles in a whole cell lysate of the WT and MHC-mutant cell lines.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Western blot for protein HLA-A2.
حسب: Queenie W. T. Chan (8976299)
منشور في: (2025)

Table 3_SAPrIm 2.0: a semi-automated protocol for mid-throughput soluble HLA immunopeptidomics.xlsx
حسب: Erwin Tanuwidjaya (14293787)
منشور في: (2025)

Table 2_SAPrIm 2.0: a semi-automated protocol for mid-throughput soluble HLA immunopeptidomics.xlsx
حسب: Erwin Tanuwidjaya (14293787)
منشور في: (2025)

Table 1_SAPrIm 2.0: a semi-automated protocol for mid-throughput soluble HLA immunopeptidomics.xlsx
حسب: Erwin Tanuwidjaya (14293787)
منشور في: (2025)

Data Sheet 1_SAPrIm 2.0: a semi-automated protocol for mid-throughput soluble HLA immunopeptidomics.docx
حسب: Erwin Tanuwidjaya (14293787)
منشور في: (2025)

Table 4_SAPrIm 2.0: a semi-automated protocol for mid-throughput soluble HLA immunopeptidomics.xlsx
حسب: Erwin Tanuwidjaya (14293787)
منشور في: (2025)

Table 1_TAPBPR promotes editing of the HLA-B44 peptide repertoire, increasing the presentation of peptides containing a C-terminal tryptophan.xlsx
حسب: Aure Aflalo (22533644)
منشور في: (2025)

Image 5_TAPBPR promotes editing of the HLA-B44 peptide repertoire, increasing the presentation of peptides containing a C-terminal tryptophan.eps
حسب: Aure Aflalo (22533644)
منشور في: (2025)

Image 2_TAPBPR promotes editing of the HLA-B44 peptide repertoire, increasing the presentation of peptides containing a C-terminal tryptophan.eps
حسب: Aure Aflalo (22533644)
منشور في: (2025)

Image 1_TAPBPR promotes editing of the HLA-B44 peptide repertoire, increasing the presentation of peptides containing a C-terminal tryptophan.eps
حسب: Aure Aflalo (22533644)
منشور في: (2025)

Image 4_TAPBPR promotes editing of the HLA-B44 peptide repertoire, increasing the presentation of peptides containing a C-terminal tryptophan.eps
حسب: Aure Aflalo (22533644)
منشور في: (2025)

Image 3_TAPBPR promotes editing of the HLA-B44 peptide repertoire, increasing the presentation of peptides containing a C-terminal tryptophan.eps
حسب: Aure Aflalo (22533644)
منشور في: (2025)

Data Sheet 1_Epitope mapping using immunopeptidomics reveals novel immunodominant CD8 T cell epitopes of the AAV9 capsid.pdf
حسب: Akhila Balasubramanian (19424881)
منشور في: (2025)

Table 1_MetE: a promising protective antigen for tuberculosis vaccine development.docx
حسب: Salem Salman Almujri (11907155)
منشور في: (2025)

Data Sheet 1_MetE: a promising protective antigen for tuberculosis vaccine development.docx
حسب: Salem Salman Almujri (11907155)
منشور في: (2025)

Table 2_NetMHCpan-4.2: improved prediction of CD8+ epitopes by use of transfer learning and structural features.xlsx
حسب: Jonas Birkelund Nilsson (11280366)
منشور في: (2025)

Table 3_NetMHCpan-4.2: improved prediction of CD8+ epitopes by use of transfer learning and structural features.xlsx
حسب: Jonas Birkelund Nilsson (11280366)
منشور في: (2025)

Table 5_NetMHCpan-4.2: improved prediction of CD8+ epitopes by use of transfer learning and structural features.xlsx
حسب: Jonas Birkelund Nilsson (11280366)
منشور في: (2025)

Table 4_NetMHCpan-4.2: improved prediction of CD8+ epitopes by use of transfer learning and structural features.xlsx
حسب: Jonas Birkelund Nilsson (11280366)
منشور في: (2025)

Data Sheet 1_NetMHCpan-4.2: improved prediction of CD8+ epitopes by use of transfer learning and structural features.docx
حسب: Jonas Birkelund Nilsson (11280366)
منشور في: (2025)

Immunopeptidomes isolated from 4 B-cell lines homozygous for HLA-C*06:02
حسب: Jörg Prinz (21362888)
منشور في: (2025)

Table 1_Case Report: A novel CIITA mutation causing MHC class II deficiency: first reported case in Morocco.pdf
حسب: Aziza Bachir Kattra (22678628)
منشور في: (2025)

Data Sheet 1_Predicting reverse-bound peptide conformations in MHC Class II with PANDORA.pdf
حسب: Daniel T. Rademaker (12521431)
منشور في: (2025)

Additional file 2 of MHCquant2 refines immunopeptidomics tumor antigen discovery
حسب: Jonas Scheid (20687779)
منشور في: (2025)

Supplementary file 1_T-cell receptors that are k-binding have defined sequence features.pdf
حسب: Hyunjin Park (447772)
منشور في: (2025)

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