Table Supplementary_cnLOH.docx

Table Supplementary_cnLOH.docx

<p dir="ltr">Copy Neutral Loss of Heterozygosity in Perihilar Cholangiocarcinoma</p>

محفوظ في:

التفاصيل البيبلوغرافية
المؤلف الرئيسي:	Sutheemon Techa-ay (21529841) (author)
منشور في:	2025
الموضوعات:	Genome structure and regulation Copy-neutral loss of heterozygosity (cn-LOH) Perihilar cholangiocarcinoma chromosomal abnormalities ), prognostic biomarker Loss of heterogeneity
الوسوم:	إضافة وسم لا توجد وسوم, كن أول من يضع وسما على هذه التسجيلة!

مواد مشابهة

Supplementary data for “Association of 12q21.32 cn‑LOH Affecting the KITLG p53 Response Element with Therapy Resistance in Acute Leukemia”
حسب: Sofiia Starchenko (22742396)
منشور في: (2025)

Table 1_Right-side versus left-side hemihepatectomy for the treatment of Bismuth type IV perihilar cholangiocarcinoma: a comparative study.docx
حسب: Wencong Ma (8906738)
منشور في: (2025)

Table 2_Right-side versus left-side hemihepatectomy for the treatment of Bismuth type IV perihilar cholangiocarcinoma: a comparative study.docx
حسب: Wencong Ma (8906738)
منشور في: (2025)

Total rDNA CN (tCN) correlates with unmethylated rDNA CN (uCN), methylated rDNA CN (mCN), and percent of methylated and unmethylated rDNA copies.
حسب: Stephen Flint Smith (22614954)
منشور في: (2025)

PAMs are maintained in regions of truncal LOH and partially lost in regions of private LOH.
حسب: Kirsten Bowland (15162758)
منشور في: (2024)

Inter-individual variability in total rDNA CN, unmethylated rDNA CN, methylated rDNA CN, contributes to similarly wide variability in percent of methylated rDNA copies.
حسب: Stephen Flint Smith (22614954)
منشور في: (2025)

LOH count, percentage of genome covered by LOH, LOH tract size, percentage of SNPs fixed, and the LOH rate in seven different environmental conditions.
حسب: Nikilesh Vijayan (21350049)
منشور في: (2025)

List of human samples used and rDNA CN measurements.
حسب: Stephen Flint Smith (22614954)
منشور في: (2025)

Distribution of interstitial and terminal LOH tracts based on LOH tract length. Histogram represents the distribution of interstitial and terminal LOH counts across different categories of LOH tract sizes.
حسب: Nikilesh Vijayan (21350049)
منشور في: (2025)

Table_1_Perihilar cholangiocarcinoma masquerading as intrahepatic cholestasis of pregnancy: a case report and review of the literature.XLSX
حسب: Chao Xiao (3418145)
منشور في: (2024)

Table_1_Perihilar cholangiocarcinoma masquerading as intrahepatic cholestasis of pregnancy: a case report and review of the literature.XLSX
حسب: Chao Xiao (3418145)
منشور في: (2024)

LOH profiles vary across environments.
حسب: Nikilesh Vijayan (21350049)
منشور في: (2025)

LOH tracts accumulated in MA lines.
حسب: Nikilesh Vijayan (21350049)
منشور في: (2025)

Environmental modulation of LOH tract size and distribution.
حسب: Nikilesh Vijayan (21350049)
منشور في: (2025)

LOH tract profile across the seven environments.
حسب: Nikilesh Vijayan (21350049)
منشور في: (2025)

List of heterozygous SNPs (52,240) from the S288c/YJM789 parent used to call LOH tracts in the MA lines.
حسب: Nikilesh Vijayan (21350049)
منشور في: (2025)

VAF and CN for truncal and private PAMs for WGS of A32 cell line T2.
حسب: Kirsten Bowland (15162758)
منشور في: (2024)

VAF and CN for truncal and private PAMs for WGS of A38 cell lines T2-4.
حسب: Kirsten Bowland (15162758)
منشور في: (2024)

Percent methylation is more disperse in males.
حسب: Stephen Flint Smith (22614954)
منشور في: (2025)

Methylation specific PCR is reproducible within a wide dynamic range.
حسب: Stephen Flint Smith (22614954)
منشور في: (2025)

Methylation detection in the rDNA 28S gene body by MSP is robust and sensitive to methylation state of specific sites.
حسب: Stephen Flint Smith (22614954)
منشور في: (2025)

Raw data for Serial dilution of DNA.
حسب: Stephen Flint Smith (22614954)
منشور في: (2025)

Primers used in this study.
حسب: Stephen Flint Smith (22614954)
منشور في: (2025)

Histograms and CN/VAF analysis for truncal PAMs in A38 WGS cell line data, by chromosome.
حسب: Kirsten Bowland (15162758)
منشور في: (2024)

Histograms and CN/VAF analysis for truncal PAMs in A38 WGS cell line data, by chromosome.
حسب: Kirsten Bowland (15162758)
منشور في: (2024)

Plots of PAM maintenance, VAF, and CN for A32 cell lines T1-2 analyzed for each chromosome arm.
حسب: Kirsten Bowland (15162758)
منشور في: (2024)

Plots of PAM maintenance, VAF, and CN for A38 cell lines T2-T4 analyzed for each chromosome arm.
حسب: Kirsten Bowland (15162758)
منشور في: (2024)

NMR data for Compound <b>5b, CN-0928-HCl and CN-0928-biotin</b>
حسب: Lu Wang (22112416)
منشور في: (2025)

Distinct chromosomal patterns in HCC and CCA: analysis of top 10 low p-value chromosome regions.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

The differential copy number variations ratios between HCC and CCA in the top 10 chromosome region with the highest fold change.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

Recurrence of chromosome abnormality in CCA.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

Recurrence of chromosome abnormality in HCC.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

Characteristics of primary liver cancer patients.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

HCC and CCA cases were validated using the FISH technique.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

The differential Log2 ratios between HCC and CCA in candidate regions.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

Identification of HCC and CCA chromosome abnormality regions.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

A heatmap clustering of chromosomal abnormality regions.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

The karyoview analysis using ChAS software.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

Workflow for chromosome data analysis.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

The p-values and log2 ratio of the top 50 chromosome probe markers and transform to copy number variations for each patient.
حسب: Wantakan Ngamsangiam (21354401)
منشور في: (2025)

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