Integrated workflow for organism-level phenotyping and machine-learning inference.

<p>Workflow schematic: (i) establish a non-adverse exposure using hatching, malformation, and survival endpoints; (ii) record behavioral (tail-swing), cardiac (heart rate), and brain-wide neural activity readouts; (iii) integrate features and perform machine-learning-based clustering against a...

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1. autor: Zhuangbin Zheng (22676304) (author)
Kolejni autorzy: Fanlei Ran (7352957) (author), Lushan Liang (22676307) (author), Yiqian Zhang (752795) (author), Xianwen Li (3910537) (author), Liqun Zhang (115900) (author), Lijun Bi (121470) (author)
Wydane: 2025
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author Zhuangbin Zheng (22676304)
author2 Fanlei Ran (7352957)
Lushan Liang (22676307)
Yiqian Zhang (752795)
Xianwen Li (3910537)
Liqun Zhang (115900)
Lijun Bi (121470)
author2_role author
author
author
author
author
author
author_facet Zhuangbin Zheng (22676304)
Fanlei Ran (7352957)
Lushan Liang (22676307)
Yiqian Zhang (752795)
Xianwen Li (3910537)
Liqun Zhang (115900)
Lijun Bi (121470)
author_role author
dc.creator.none.fl_str_mv Zhuangbin Zheng (22676304)
Fanlei Ran (7352957)
Lushan Liang (22676307)
Yiqian Zhang (752795)
Xianwen Li (3910537)
Liqun Zhang (115900)
Lijun Bi (121470)
dc.date.none.fl_str_mv 2025-11-24T18:22:38Z
dc.identifier.none.fl_str_mv 10.1371/journal.pone.0336479.g004
dc.relation.none.fl_str_mv https://figshare.com/articles/figure/Integrated_workflow_for_organism-level_phenotyping_and_machine-learning_inference_/30696447
dc.rights.none.fl_str_mv CC BY 4.0
info:eu-repo/semantics/openAccess
dc.subject.none.fl_str_mv Pharmacology
Biotechnology
Evolutionary Biology
Immunology
Infectious Diseases
Biological Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
total antioxidant capacity
recent studies indicate
prior preparation work
pollutant degradation owing
larva zebrafish (<
high reducing power
danio rerio </
ebl ), reference
transiently generated e
div >< p
1 mv ),
biomedical effects study
level effects
ebl ’
biomedical potential
biomedical application
widely studied
uric acid
reduction potential
precluding storage
ph 13
orp 47
new potentials
hypoglycemic drugs
hydrated electrons
findings motivate
biological investigation
adverse concentration
dc.title.none.fl_str_mv Integrated workflow for organism-level phenotyping and machine-learning inference.
dc.type.none.fl_str_mv Image
Figure
info:eu-repo/semantics/publishedVersion
image
description <p>Workflow schematic: (i) establish a non-adverse exposure using hatching, malformation, and survival endpoints; (ii) record behavioral (tail-swing), cardiac (heart rate), and brain-wide neural activity readouts; (iii) integrate features and perform machine-learning-based clustering against a reference drug database to infer functional similarity.</p>
eu_rights_str_mv openAccess
id Manara_acdc0f79b62d65cc65b90c9ded2284cc
identifier_str_mv 10.1371/journal.pone.0336479.g004
network_acronym_str Manara
network_name_str ManaraRepo
oai_identifier_str oai:figshare.com:article/30696447
publishDate 2025
repository.mail.fl_str_mv
repository.name.fl_str_mv
repository_id_str
rights_invalid_str_mv CC BY 4.0
spelling Integrated workflow for organism-level phenotyping and machine-learning inference.Zhuangbin Zheng (22676304)Fanlei Ran (7352957)Lushan Liang (22676307)Yiqian Zhang (752795)Xianwen Li (3910537)Liqun Zhang (115900)Lijun Bi (121470)PharmacologyBiotechnologyEvolutionary BiologyImmunologyInfectious DiseasesBiological Sciences not elsewhere classifiedChemical Sciences not elsewhere classifiedtotal antioxidant capacityrecent studies indicateprior preparation workpollutant degradation owinglarva zebrafish (<high reducing powerdanio rerio </ebl ), referencetransiently generated ediv >< p1 mv ),biomedical effects studylevel effectsebl ’biomedical potentialbiomedical applicationwidely studieduric acidreduction potentialprecluding storageph 13orp 47new potentialshypoglycemic drugshydrated electronsfindings motivatebiological investigationadverse concentration<p>Workflow schematic: (i) establish a non-adverse exposure using hatching, malformation, and survival endpoints; (ii) record behavioral (tail-swing), cardiac (heart rate), and brain-wide neural activity readouts; (iii) integrate features and perform machine-learning-based clustering against a reference drug database to infer functional similarity.</p>2025-11-24T18:22:38ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1371/journal.pone.0336479.g004https://figshare.com/articles/figure/Integrated_workflow_for_organism-level_phenotyping_and_machine-learning_inference_/30696447CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/306964472025-11-24T18:22:38Z
spellingShingle Integrated workflow for organism-level phenotyping and machine-learning inference.
Zhuangbin Zheng (22676304)
Pharmacology
Biotechnology
Evolutionary Biology
Immunology
Infectious Diseases
Biological Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
total antioxidant capacity
recent studies indicate
prior preparation work
pollutant degradation owing
larva zebrafish (<
high reducing power
danio rerio </
ebl ), reference
transiently generated e
div >< p
1 mv ),
biomedical effects study
level effects
ebl ’
biomedical potential
biomedical application
widely studied
uric acid
reduction potential
precluding storage
ph 13
orp 47
new potentials
hypoglycemic drugs
hydrated electrons
findings motivate
biological investigation
adverse concentration
status_str publishedVersion
title Integrated workflow for organism-level phenotyping and machine-learning inference.
title_full Integrated workflow for organism-level phenotyping and machine-learning inference.
title_fullStr Integrated workflow for organism-level phenotyping and machine-learning inference.
title_full_unstemmed Integrated workflow for organism-level phenotyping and machine-learning inference.
title_short Integrated workflow for organism-level phenotyping and machine-learning inference.
title_sort Integrated workflow for organism-level phenotyping and machine-learning inference.
topic Pharmacology
Biotechnology
Evolutionary Biology
Immunology
Infectious Diseases
Biological Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
total antioxidant capacity
recent studies indicate
prior preparation work
pollutant degradation owing
larva zebrafish (<
high reducing power
danio rerio </
ebl ), reference
transiently generated e
div >< p
1 mv ),
biomedical effects study
level effects
ebl ’
biomedical potential
biomedical application
widely studied
uric acid
reduction potential
precluding storage
ph 13
orp 47
new potentials
hypoglycemic drugs
hydrated electrons
findings motivate
biological investigation
adverse concentration