Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin.
<p>(A) bar graph of LDA scores for three groups (BSFL, plant oil, and animal fats), representing log10-transformed values for differentially abundant taxa; (B) cladogram illustrating phylogenetic relationships between taxa with significant differences in abundance across three groups (BSFL, pl...
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2025
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| _version_ | 1849927628001116160 |
|---|---|
| author | Muhammad Rumman Aslam (22683482) |
| author2 | Bartosz Kierończyk (500220) Piotr Szymkowiak (22683485) Liliana Ciesielska (22683488) Mateusz Rawski (500223) Robert Mikuła (6595409) Damian Józefiak (500219) |
| author2_role | author author author author author author |
| author_facet | Muhammad Rumman Aslam (22683482) Bartosz Kierończyk (500220) Piotr Szymkowiak (22683485) Liliana Ciesielska (22683488) Mateusz Rawski (500223) Robert Mikuła (6595409) Damian Józefiak (500219) |
| author_role | author |
| dc.creator.none.fl_str_mv | Muhammad Rumman Aslam (22683482) Bartosz Kierończyk (500220) Piotr Szymkowiak (22683485) Liliana Ciesielska (22683488) Mateusz Rawski (500223) Robert Mikuła (6595409) Damian Józefiak (500219) |
| dc.date.none.fl_str_mv | 2025-11-25T18:31:04Z |
| dc.identifier.none.fl_str_mv | 10.1371/journal.pone.0336523.g004 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/figure/Linear_discriminant_analysis_effect_size_LEfSe_at_various_taxonomic_levels_kingdom_k_phylum_p_class_c_order_o_family_f_genus_g_and_species_s_for_broiler_chickens_fed_diets_containing_fats_of_plant_animal_and_insect_origin_/30714101 |
| dc.rights.none.fl_str_mv | CC BY 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Biochemistry Microbiology Molecular Biology Biotechnology Ecology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified various dietary fats selected animal fats lefse analysis revealed inhibiting opportunistic pathogens broilers responds similarly broiler chicken nutrition hermetia illucens </ eubacterium coprostanoligenes </ clostridia vadin </ eight dietary groups 10 replicate pens 011 ), enterobacteriaceae 003 ), rhodospirillales 001 ), rikenellaceae ), rapeseed oil bsfl significantly reduced bsfl positively affects including ph determination div >< p 025 ), peptococcaceae 35 days ), including bsfl fat 35 days 025 ), shigella </ alistipes </ pl ), 10 birds 048 ), 032 ), 018 ), bsfl treatment bsfl increased bsfl fat pkfd groups upper part uncultured genus study design study aimed sole source significant reduction randomly assigned ngs ). gut ph generation sequencing findings suggest detected among cecal microbiota cecal microbiome cecal environment |
| dc.title.none.fl_str_mv | Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin. |
| dc.type.none.fl_str_mv | Image Figure info:eu-repo/semantics/publishedVersion image |
| description | <p>(A) bar graph of LDA scores for three groups (BSFL, plant oil, and animal fats), representing log10-transformed values for differentially abundant taxa; (B) cladogram illustrating phylogenetic relationships between taxa with significant differences in abundance across three groups (BSFL, plant oil, and animal fats). BSFL – basal diet with 100% black soldier fly (<i>Hermetia illucens</i>) larval fat; plant oils (SO – basal diet with 100% soybean oil; RO – basal diet with 100% rapeseed oil; PO – basal diet with 100% palm oil; PKFD – basal diet with 100% palm kernel fat distillate); animal fats (PF – basal diet with 100% poultry fat; PL – basal diet with 100% pig lard; BT – basal diet with 100% beef tallow).</p> |
| eu_rights_str_mv | openAccess |
| id | Manara_ad8ac2e9bb088e50ed8f13e000e46af6 |
| identifier_str_mv | 10.1371/journal.pone.0336523.g004 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/30714101 |
| publishDate | 2025 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY 4.0 |
| spelling | Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin.Muhammad Rumman Aslam (22683482)Bartosz Kierończyk (500220)Piotr Szymkowiak (22683485)Liliana Ciesielska (22683488)Mateusz Rawski (500223)Robert Mikuła (6595409)Damian Józefiak (500219)BiochemistryMicrobiologyMolecular BiologyBiotechnologyEcologyEnvironmental Sciences not elsewhere classifiedBiological Sciences not elsewhere classifiedChemical Sciences not elsewhere classifiedvarious dietary fatsselected animal fatslefse analysis revealedinhibiting opportunistic pathogensbroilers responds similarlybroiler chicken nutritionhermetia illucens </eubacterium coprostanoligenes </clostridia vadin </eight dietary groups10 replicate pens011 ), enterobacteriaceae003 ), rhodospirillales001 ), rikenellaceae), rapeseed oilbsfl significantly reducedbsfl positively affectsincluding ph determinationdiv >< p025 ), peptococcaceae35 days ),including bsfl fat35 days025 ),shigella </alistipes </pl ),10 birds048 ),032 ),018 ),bsfl treatmentbsfl increasedbsfl fatpkfd groupsupper partuncultured genusstudy designstudy aimedsole sourcesignificant reductionrandomly assignedngs ).gut phgeneration sequencingfindings suggestdetected amongcecal microbiotacecal microbiomececal environment<p>(A) bar graph of LDA scores for three groups (BSFL, plant oil, and animal fats), representing log10-transformed values for differentially abundant taxa; (B) cladogram illustrating phylogenetic relationships between taxa with significant differences in abundance across three groups (BSFL, plant oil, and animal fats). BSFL – basal diet with 100% black soldier fly (<i>Hermetia illucens</i>) larval fat; plant oils (SO – basal diet with 100% soybean oil; RO – basal diet with 100% rapeseed oil; PO – basal diet with 100% palm oil; PKFD – basal diet with 100% palm kernel fat distillate); animal fats (PF – basal diet with 100% poultry fat; PL – basal diet with 100% pig lard; BT – basal diet with 100% beef tallow).</p>2025-11-25T18:31:04ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1371/journal.pone.0336523.g004https://figshare.com/articles/figure/Linear_discriminant_analysis_effect_size_LEfSe_at_various_taxonomic_levels_kingdom_k_phylum_p_class_c_order_o_family_f_genus_g_and_species_s_for_broiler_chickens_fed_diets_containing_fats_of_plant_animal_and_insect_origin_/30714101CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/307141012025-11-25T18:31:04Z |
| spellingShingle | Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin. Muhammad Rumman Aslam (22683482) Biochemistry Microbiology Molecular Biology Biotechnology Ecology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified various dietary fats selected animal fats lefse analysis revealed inhibiting opportunistic pathogens broilers responds similarly broiler chicken nutrition hermetia illucens </ eubacterium coprostanoligenes </ clostridia vadin </ eight dietary groups 10 replicate pens 011 ), enterobacteriaceae 003 ), rhodospirillales 001 ), rikenellaceae ), rapeseed oil bsfl significantly reduced bsfl positively affects including ph determination div >< p 025 ), peptococcaceae 35 days ), including bsfl fat 35 days 025 ), shigella </ alistipes </ pl ), 10 birds 048 ), 032 ), 018 ), bsfl treatment bsfl increased bsfl fat pkfd groups upper part uncultured genus study design study aimed sole source significant reduction randomly assigned ngs ). gut ph generation sequencing findings suggest detected among cecal microbiota cecal microbiome cecal environment |
| status_str | publishedVersion |
| title | Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin. |
| title_full | Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin. |
| title_fullStr | Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin. |
| title_full_unstemmed | Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin. |
| title_short | Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin. |
| title_sort | Linear discriminant analysis effect size (LEfSe) at various taxonomic levels (kingdom (k), phylum (p), class (c), order (o), family (f), genus (g), and species (s)) for broiler chickens fed diets containing fats of plant, animal, and insect origin. |
| topic | Biochemistry Microbiology Molecular Biology Biotechnology Ecology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified various dietary fats selected animal fats lefse analysis revealed inhibiting opportunistic pathogens broilers responds similarly broiler chicken nutrition hermetia illucens </ eubacterium coprostanoligenes </ clostridia vadin </ eight dietary groups 10 replicate pens 011 ), enterobacteriaceae 003 ), rhodospirillales 001 ), rikenellaceae ), rapeseed oil bsfl significantly reduced bsfl positively affects including ph determination div >< p 025 ), peptococcaceae 35 days ), including bsfl fat 35 days 025 ), shigella </ alistipes </ pl ), 10 birds 048 ), 032 ), 018 ), bsfl treatment bsfl increased bsfl fat pkfd groups upper part uncultured genus study design study aimed sole source significant reduction randomly assigned ngs ). gut ph generation sequencing findings suggest detected among cecal microbiota cecal microbiome cecal environment |