Selected bacterial genomes with large numbers of orthologous PEIs.

Selected bacterial genomes with large numbers of orthologous PEIs.

<p>Selected bacterial genomes with large numbers of orthologous PEIs.</p>

محفوظ في:

التفاصيل البيبلوغرافية
المؤلف الرئيسي:	Shomeek Chowdhury (3763576) (author)
مؤلفون آخرون:	Stephen S. Fong (20670943) (author), Peter Uetz (14618) (author)
منشور في:	2025
الموضوعات:	Biophysics Biochemistry Microbiology Cell Biology Molecular Biology Ecology Inorganic Chemistry Virology Astronomical and Space Sciences not elsewhere classified Biological Sciences not elsewhere classified div >< p conserved across thousands bacteria including pathogens different cellular environments predict 3 ppis affect enzyme activity escherichia coli </ regulate carbohydrate metabolism coli </ specific environments carbohydrate metabolism e </ thus likely specifically investigated microbial species likely mechanism interacting proteins enzyme interaction 48 interactions 25 ppis
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مواد مشابهة

Impact of growth condition on abundance and ratios of PEIs.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

The conservation value as a measure of PEI conservation.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Identification of 16 PEIs as metabolism regulators among 378 PEIs of <i>E</i>. <i>coli</i> carbohydrate metabolism.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Number of CHM PEIs at specific interactor/enzyme ratios.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Absolute abundance of PEI Frr-GalK in 22 different growth conditions.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Absolute abundance of PEI Frr-GalK in 22 different growth conditions.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

<i>E</i>. <i>coli</i> PEIs predicted as potential regulators of metabolism.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Absolute abundance of PEI YadG-GadB in 22 different growth conditions.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Secondary proteins-affected PEIs based on overlapping binding sites between the proteins involved in the interactions.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

<i>E</i>. <i>coli</i> PEIs possibly regulated by secondary interactors based on abundance.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Number of enzymes of <i>E</i>. <i>coli</i> carbohydrate metabolism pathways based on KEGG [2].
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Statistics for metabolic pathways, enzymes, and their interactions in <i>Escherichia coli</i>. For a complete list of proteins see S1 Table in S1 File.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Abundance of binding proteins TalB and LeuD in 22 different growth conditions.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Enzyme-enzyme interaction between citrate synthase (GltA) and pyruvate kinase (PykF).
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Fig 12 -
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Abundance of enolase (Eno) and its binding enzyme GlpK in different metabolic states.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Conservation of interactions in CHM.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

<i>E</i>. <i>coli</i> carbohydrate pathway is the largest of all pathways.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Interactions in <i>E</i>. <i>coli</i> carbohydrate pathways correlate with pathway size.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

<i>E</i>. <i>coli</i> carbohydrate enzymes primarily interact with other metabolic enzymes.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

FrdA and FrdB interaction.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Classification of enzyme interactors into metabolic and non-metabolic.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

S1 File -
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Enzyme FdoG, (dehydrogenizing formate) and its interactor, FdhE simultaneously increase abundance dramatically in LB but are less abundant in other growth conditions.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

Enzyme IlvB depends (enzyme of butanoate and C5-branched dibasic acid metabolism) on its interactor IlvN for its function.
حسب: Shomeek Chowdhury (3763576)
منشور في: (2025)

HitPredict interactions - version 15Jul2024
حسب: Ashwini Patil (6395363)
منشور في: (2025)

MAGPIE: A Machine Learning Approach to Decipher Protein–Protein Interactions in Human Plasma
حسب: Emily Hashimoto-Roth (9564009)
منشور في: (2025)

MAGPIE: A Machine Learning Approach to Decipher Protein–Protein Interactions in Human Plasma
حسب: Emily Hashimoto-Roth (9564009)
منشور في: (2025)

Critical proteins associated with SCA1 pathology.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Enrichment analysis of predicted effectors.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Properties of the 14 features that were used for building the model.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Properties of the hPIN.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Structure of the work presented in this manuscript.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Components of a critical PPI network involved in SCA1 pathogenesis.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Significantly dysregulated proteins (|log2FC | ≤ 0.5, adj. p-value ≤ 0.05) in SCA1 (805 proteins).
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Prediction scores of directed PTM-PPIs.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Training dataset of experimentally known phosphorylation and dephosphorylation PPIs.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Edges of the hPIN.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Nodes of the hPIN.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

Connectivity of dysregulated proteins in SCA1 cells.
حسب: Aimilia-Christina Vagiona (17584758)
منشور في: (2025)

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