Protein-lipid dynamic cross correlation maps for <i>Surface</i> replicas 2 and 4 during the entire trajectory.

Protein-lipid dynamic cross correlation maps for <i>Surface</i> replicas 2 and 4 during the entire trajectory.

<p>Negative and positive correlations represented in blue and red respectively.</p> <p>(TIFF)</p>

שמור ב:

מידע ביבליוגרפי
מחבר ראשי:	Oluwatoyin Campbell (14392137) (author)
מחברים אחרים:	Dina Dahhan (22683620) (author), Viviana Monje (2056069) (author)
יצא לאור:	2025
נושאים:	Biophysics Biochemistry Cell Biology Genetics Molecular Biology Biotechnology Cancer Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified Physical Sciences not elsewhere classified Information Systems not elsewhere classified process may help complex transmembrane topology comparing dimer interactions aqueous solution versus promote p7 oligomerization protein residue alignment p7 dimers driven alignment underlie health study demonstrates particularly involving often composed molecular mechanisms key residues hydrophobic contacts hydrogen bonding first helix explain assembly dynamic contributors channel assembly
תגים:	הוספת תג אין תגיות, היה/י הראשונ/ה לתייג את הרשומה!

פריטים דומים

Initial positioning of monomers in replicas 1, 2, 3 and 4 of <i>Surface</i> model.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Protein-lipid interactions in the <i>Surface</i> model.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

RMSF per residue in individual p7 monomers for each <i>Sep</i> and <i>Surface</i> model replicas.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Correlation of protein and lipid motions in the <i>Surface</i> model.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Surface replica 4 structural evaluation.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Frequency of hydrogen bonds between individual residues and lipid species during the last half of trajectory (500 ns) in the <i>Surface</i> model.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Protein conformational dynamics induced by presence of a lipid membrane.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Distance of each amino acid from the average position of phosphorus atoms in the contacting membrane leaflet in the <i>Surface</i> systems.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Snapshot showing cholesterol contacts with the N-terminus of p2 and H2 and H3 of p1 in the <i>Surface</i> model.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Deviations of the <i>Bound</i> model protein dimer conformation from the reference crystal structure of the channel (PDBID: 2M6X).
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Tilt angle conformational landscapes of residues involved in 1-to-1 helix contacts during the last 500 ns of trajectory in the <i>Surface</i> model.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Tilt angle conformational landscapes of residues involved in 1-to-1 helix contacts during the last 200 ns of trajectory in the <i>Sep</i> model.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Suggested mechanism of p7 dimerization at the ER membrane surface, based on results from this study.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Energetics of protein interactions.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Residue contact comparison with reference dimer structure.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Initial simulation coordinates.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Coulomb (electrostatic), Lennard-Jones (hydrophobic), and total interaction energy of interacting monomer helices in each model.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Root mean square deviation measurements of monomers.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

List of protein residues and selected atoms to define the tilt angle vectors.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Description of systems studied.
מאת: Oluwatoyin Campbell (14392137)
יצא לאור: (2025)

Structural Evidence of Interanionic Hydrogen Bonding in Phosphoric Acid Solutions
מאת: Pyeongeun Kim (9509954)
יצא לאור: (2025)

Lipid residency distributions during coarse-grained simulations of YbbAP.
מאת: Martin B. L. McAndrew (22683641)
יצא לאור: (2025)

A Series of Experiments on Criticality and Reflector Reactivity Worth in FCA-XXIII-1 and FCA-XXIV-1 Assemblies Simulating a Small Fast Reactor with a Thick Stainless Steel Reflector
מאת: Masahiro Fukushima (2249263)
יצא לאור: (2025)

Transfer task (pre- and post-test) design and information alignment.
מאת: Denise Moerel (9080849)
יצא לאור: (2025)

The contribution of shared rules to neural information alignment, for the first (A) and second (B) experiment half.
מאת: Denise Moerel (9080849)
יצא לאור: (2025)

The time-course of information alignment, split by first and second experiment half.
מאת: Denise Moerel (9080849)
יצא לאור: (2025)

The time-course of information alignment.
מאת: Denise Moerel (9080849)
יצא לאור: (2025)

Information alignment between the two individuals in each pair.
מאת: Denise Moerel (9080849)
יצא לאור: (2025)

Stimuli, experiment procedure, and behavioral results.
מאת: Denise Moerel (9080849)
יצא לאור: (2025)

Molecular dynamics simulations of YbbAP suggest the periplasmic-side pocket is a lipid-binding site.
מאת: Martin B. L. McAndrew (22683641)
יצא לאור: (2025)

Atomistic molecular dynamics simulation showing partial extraction of a lipid from the bilayer by YbbAP.
מאת: Martin B. L. McAndrew (22683641)
יצא לאור: (2025)

Human Values, Purpose & Meaning 2025 (Dataset)
מאת: Human Clarity Institute (22464229)
יצא לאור: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
מאת: Neval Yilmaz (1544557)
יצא לאור: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
מאת: Neval Yilmaz (1544557)
יצא לאור: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
מאת: Neval Yilmaz (1544557)
יצא לאור: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
מאת: Neval Yilmaz (1544557)
יצא לאור: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
מאת: Neval Yilmaz (1544557)
יצא לאור: (2025)

Individual memory performance was predicted by a subset of iEEG signal components.
מאת: Adam J. O. Dede (11554007)
יצא לאור: (2025)

Characteristics of patients infected with norovirus GII.
מאת: Leera Kittigul (22676501)
יצא לאור: (2025)

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