Gating strategy applied to the data.
<p>Myeloids and lymphocytes can not be assigned but are shown for visual reasons.</p> <p>(TIF)</p>
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2025
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| _version_ | 1852016587660328960 |
|---|---|
| author | Matthias Bruhns (22250913) |
| author2 | Jan T. Schleicher (22250916) Maximilian Wirth (16868202) Marcello Zago (22250919) Sepideh Babaei (737927) Manfred Claassen (2697070) |
| author2_role | author author author author author |
| author_facet | Matthias Bruhns (22250913) Jan T. Schleicher (22250916) Maximilian Wirth (16868202) Marcello Zago (22250919) Sepideh Babaei (737927) Manfred Claassen (2697070) |
| author_role | author |
| dc.creator.none.fl_str_mv | Matthias Bruhns (22250913) Jan T. Schleicher (22250916) Maximilian Wirth (16868202) Marcello Zago (22250919) Sepideh Babaei (737927) Manfred Claassen (2697070) |
| dc.date.none.fl_str_mv | 2025-09-15T17:51:29Z |
| dc.identifier.none.fl_str_mv | 10.1371/journal.pcbi.1013350.s004 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/figure/Gating_strategy_applied_to_the_data_/30131673 |
| dc.rights.none.fl_str_mv | CC BY 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Biophysics Biochemistry Cell Biology Genetics Molecular Biology Physiology Developmental Biology Space Science Biological Sciences not elsewhere classified Mathematical Sciences not elsewhere classified Information Systems not elsewhere classified uses affine transformations smaller neighborhood sizes generate expression profiles controlled perturbation conditions defines cell boundaries cell imaging technologies segmentation inaccuracies propagate segmentation error leading considering segmentation inaccuracies mitigate spurious results accurate cell segmentation probabilistic modeling framework downstream analysis tasks cell level segmentation errors segmentation algorithms quality segmentation results highlight variations induced unsupervised k tissue organization thereby enabling notable misclassifications higher levels feature space ensuring high downstream analyses deeper understanding clustering analyses approach mimics analytical pipelines allowing us adversely impacted advancements rely |
| dc.title.none.fl_str_mv | Gating strategy applied to the data. |
| dc.type.none.fl_str_mv | Image Figure info:eu-repo/semantics/publishedVersion image |
| description | <p>Myeloids and lymphocytes can not be assigned but are shown for visual reasons.</p> <p>(TIF)</p> |
| eu_rights_str_mv | openAccess |
| id | Manara_ceabcd9367bbf9bc5c5adfa0da996f13 |
| identifier_str_mv | 10.1371/journal.pcbi.1013350.s004 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/30131673 |
| publishDate | 2025 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY 4.0 |
| spelling | Gating strategy applied to the data.Matthias Bruhns (22250913)Jan T. Schleicher (22250916)Maximilian Wirth (16868202)Marcello Zago (22250919)Sepideh Babaei (737927)Manfred Claassen (2697070)BiophysicsBiochemistryCell BiologyGeneticsMolecular BiologyPhysiologyDevelopmental BiologySpace ScienceBiological Sciences not elsewhere classifiedMathematical Sciences not elsewhere classifiedInformation Systems not elsewhere classifieduses affine transformationssmaller neighborhood sizesgenerate expression profilescontrolled perturbation conditionsdefines cell boundariescell imaging technologiessegmentation inaccuracies propagatesegmentation error leadingconsidering segmentation inaccuraciesmitigate spurious resultsaccurate cell segmentationprobabilistic modeling frameworkdownstream analysis taskscell levelsegmentation errorssegmentation algorithmsquality segmentationresults highlightvariations inducedunsupervised ktissue organizationthereby enablingnotable misclassificationshigher levelsfeature spaceensuring highdownstream analysesdeeper understandingclustering analysesapproach mimicsanalytical pipelinesallowing usadversely impactedadvancements rely<p>Myeloids and lymphocytes can not be assigned but are shown for visual reasons.</p> <p>(TIF)</p>2025-09-15T17:51:29ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1371/journal.pcbi.1013350.s004https://figshare.com/articles/figure/Gating_strategy_applied_to_the_data_/30131673CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/301316732025-09-15T17:51:29Z |
| spellingShingle | Gating strategy applied to the data. Matthias Bruhns (22250913) Biophysics Biochemistry Cell Biology Genetics Molecular Biology Physiology Developmental Biology Space Science Biological Sciences not elsewhere classified Mathematical Sciences not elsewhere classified Information Systems not elsewhere classified uses affine transformations smaller neighborhood sizes generate expression profiles controlled perturbation conditions defines cell boundaries cell imaging technologies segmentation inaccuracies propagate segmentation error leading considering segmentation inaccuracies mitigate spurious results accurate cell segmentation probabilistic modeling framework downstream analysis tasks cell level segmentation errors segmentation algorithms quality segmentation results highlight variations induced unsupervised k tissue organization thereby enabling notable misclassifications higher levels feature space ensuring high downstream analyses deeper understanding clustering analyses approach mimics analytical pipelines allowing us adversely impacted advancements rely |
| status_str | publishedVersion |
| title | Gating strategy applied to the data. |
| title_full | Gating strategy applied to the data. |
| title_fullStr | Gating strategy applied to the data. |
| title_full_unstemmed | Gating strategy applied to the data. |
| title_short | Gating strategy applied to the data. |
| title_sort | Gating strategy applied to the data. |
| topic | Biophysics Biochemistry Cell Biology Genetics Molecular Biology Physiology Developmental Biology Space Science Biological Sciences not elsewhere classified Mathematical Sciences not elsewhere classified Information Systems not elsewhere classified uses affine transformations smaller neighborhood sizes generate expression profiles controlled perturbation conditions defines cell boundaries cell imaging technologies segmentation inaccuracies propagate segmentation error leading considering segmentation inaccuracies mitigate spurious results accurate cell segmentation probabilistic modeling framework downstream analysis tasks cell level segmentation errors segmentation algorithms quality segmentation results highlight variations induced unsupervised k tissue organization thereby enabling notable misclassifications higher levels feature space ensuring high downstream analyses deeper understanding clustering analyses approach mimics analytical pipelines allowing us adversely impacted advancements rely |