This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.

<p>This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.</p>

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Bibliographic Details
Main Author: Caesar Tawfeeq (21087272) (author)
Other Authors: Jiyao Wang (2121157) (author), Umesh Khaniya (8822018) (author), Thomas Madej (185877) (author), James Song (4570324) (author), Ravinder Abrol (1425607) (author), Philippe Youkharibache (266279) (author)
Published: 2025
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author Caesar Tawfeeq (21087272)
author2 Jiyao Wang (2121157)
Umesh Khaniya (8822018)
Thomas Madej (185877)
James Song (4570324)
Ravinder Abrol (1425607)
Philippe Youkharibache (266279)
author2_role author
author
author
author
author
author
author_facet Caesar Tawfeeq (21087272)
Jiyao Wang (2121157)
Umesh Khaniya (8822018)
Thomas Madej (185877)
James Song (4570324)
Ravinder Abrol (1425607)
Philippe Youkharibache (266279)
author_role author
dc.creator.none.fl_str_mv Caesar Tawfeeq (21087272)
Jiyao Wang (2121157)
Umesh Khaniya (8822018)
Thomas Madej (185877)
James Song (4570324)
Ravinder Abrol (1425607)
Philippe Youkharibache (266279)
dc.date.none.fl_str_mv 2025-04-14T17:25:43Z
dc.identifier.none.fl_str_mv 10.1371/journal.pcbi.1012813.s011
dc.relation.none.fl_str_mv https://figshare.com/articles/software/This_is_the_refnum_js_script_from_iCn3D_node_js_framework_to_assign_IgStrand_numbers_to_any_input_protein_structures_with_Ig_domains_/28790147
dc.rights.none.fl_str_mv CC BY 4.0
info:eu-repo/semantics/openAccess
dc.subject.none.fl_str_mv Biophysics
Biochemistry
Cell Biology
Genetics
Biotechnology
Immunology
Developmental Biology
Infectious Diseases
Virology
Biological Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
Physical Sciences not elsewhere classified
protein engineering around
protein coding regions
accurate machine learning
numbering scheme powers
molecular interaction systems
current estimates ranging
div >< p
domain variants constituting
systematically recognize ig
extended ” architecture
common structural signature
like domain variants
robust fold detection
interactomes </ p
ig structural proteomes
structural variants
systems </
domain sharing
scheme provides
current databases
structural proteomes
comparative structural
extended domains
“ ig
ig interactomes
wide spectrum
vascular system
systematic annotation
straightforward based
sheds light
remarkable property
reliably fold
populous fold
poorly annotated
particular jelly
nervous system
muscular system
much higher
labeling mechanism
key elements
immune system
human genome
evolutionary analyses
diverse topologies
classified today
cell recognition
algorithm implemented
>&# 8220
dc.title.none.fl_str_mv This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.
dc.type.none.fl_str_mv Software
info:eu-repo/semantics/publishedVersion
software
description <p>This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.</p>
eu_rights_str_mv openAccess
id Manara_d2017ed89fd15ec63e09f754c896ff0b
identifier_str_mv 10.1371/journal.pcbi.1012813.s011
network_acronym_str Manara
network_name_str ManaraRepo
oai_identifier_str oai:figshare.com:article/28790147
publishDate 2025
repository.mail.fl_str_mv
repository.name.fl_str_mv
repository_id_str
rights_invalid_str_mv CC BY 4.0
spelling This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.Caesar Tawfeeq (21087272)Jiyao Wang (2121157)Umesh Khaniya (8822018)Thomas Madej (185877)James Song (4570324)Ravinder Abrol (1425607)Philippe Youkharibache (266279)BiophysicsBiochemistryCell BiologyGeneticsBiotechnologyImmunologyDevelopmental BiologyInfectious DiseasesVirologyBiological Sciences not elsewhere classifiedChemical Sciences not elsewhere classifiedPhysical Sciences not elsewhere classifiedprotein engineering aroundprotein coding regionsaccurate machine learningnumbering scheme powersmolecular interaction systemscurrent estimates rangingdiv >< pdomain variants constitutingsystematically recognize igextended ” architecturecommon structural signaturelike domain variantsrobust fold detectioninteractomes </ pig structural proteomesstructural variantssystems </domain sharingscheme providescurrent databasesstructural proteomescomparative structuralextended domains“ igig interactomeswide spectrumvascular systemsystematic annotationstraightforward basedsheds lightremarkable propertyreliably foldpopulous foldpoorly annotatedparticular jellynervous systemmuscular systemmuch higherlabeling mechanismkey elementsimmune systemhuman genomeevolutionary analysesdiverse topologiesclassified todaycell recognitionalgorithm implemented>&# 8220<p>This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.</p>2025-04-14T17:25:43ZSoftwareinfo:eu-repo/semantics/publishedVersionsoftware10.1371/journal.pcbi.1012813.s011https://figshare.com/articles/software/This_is_the_refnum_js_script_from_iCn3D_node_js_framework_to_assign_IgStrand_numbers_to_any_input_protein_structures_with_Ig_domains_/28790147CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/287901472025-04-14T17:25:43Z
spellingShingle This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.
Caesar Tawfeeq (21087272)
Biophysics
Biochemistry
Cell Biology
Genetics
Biotechnology
Immunology
Developmental Biology
Infectious Diseases
Virology
Biological Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
Physical Sciences not elsewhere classified
protein engineering around
protein coding regions
accurate machine learning
numbering scheme powers
molecular interaction systems
current estimates ranging
div >< p
domain variants constituting
systematically recognize ig
extended ” architecture
common structural signature
like domain variants
robust fold detection
interactomes </ p
ig structural proteomes
structural variants
systems </
domain sharing
scheme provides
current databases
structural proteomes
comparative structural
extended domains
“ ig
ig interactomes
wide spectrum
vascular system
systematic annotation
straightforward based
sheds light
remarkable property
reliably fold
populous fold
poorly annotated
particular jelly
nervous system
muscular system
much higher
labeling mechanism
key elements
immune system
human genome
evolutionary analyses
diverse topologies
classified today
cell recognition
algorithm implemented
>&# 8220
status_str publishedVersion
title This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.
title_full This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.
title_fullStr This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.
title_full_unstemmed This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.
title_short This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.
title_sort This is the refnum.js script from iCn3D node.js framework, to assign IgStrand numbers to any input protein structures with Ig domains.
topic Biophysics
Biochemistry
Cell Biology
Genetics
Biotechnology
Immunology
Developmental Biology
Infectious Diseases
Virology
Biological Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
Physical Sciences not elsewhere classified
protein engineering around
protein coding regions
accurate machine learning
numbering scheme powers
molecular interaction systems
current estimates ranging
div >< p
domain variants constituting
systematically recognize ig
extended ” architecture
common structural signature
like domain variants
robust fold detection
interactomes </ p
ig structural proteomes
structural variants
systems </
domain sharing
scheme provides
current databases
structural proteomes
comparative structural
extended domains
“ ig
ig interactomes
wide spectrum
vascular system
systematic annotation
straightforward based
sheds light
remarkable property
reliably fold
populous fold
poorly annotated
particular jelly
nervous system
muscular system
much higher
labeling mechanism
key elements
immune system
human genome
evolutionary analyses
diverse topologies
classified today
cell recognition
algorithm implemented
>&# 8220