Algorithm detection steps.
<p>(A) Original image of Ribeiro et al’s (top) and Dostanic et al.’s platforms (bottom). (B) Image processing. The images are converted to grayscale, processed by the bilateral filter and lastly by complementary morphological transformations (erosion and dilation). Then, thresholding step of c...
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2025
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| _version_ | 1852022715786985472 |
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| author | José M. Rivera-Arbeláez (12418512) |
| author2 | Milica Dostanić (20721654) Laura M. Windt (20721657) Jeroen M. Stein (20721660) Carla Cofiño-Fabres (12418515) Tom Boonen (12418521) Maury Wiendels (9728419) Albert van den Berg (451916) Loes I. Segerink (6469727) Christine L. Mummery (206109) Pasqualina M. Sarro (12467704) Berend J. van Meer (20721663) Marcelo C. Ribeiro (12418530) Massimo Mastrangeli (1727749) Robert Passier (206087) |
| author2_role | author author author author author author author author author author author author author author |
| author_facet | José M. Rivera-Arbeláez (12418512) Milica Dostanić (20721654) Laura M. Windt (20721657) Jeroen M. Stein (20721660) Carla Cofiño-Fabres (12418515) Tom Boonen (12418521) Maury Wiendels (9728419) Albert van den Berg (451916) Loes I. Segerink (6469727) Christine L. Mummery (206109) Pasqualina M. Sarro (12467704) Berend J. van Meer (20721663) Marcelo C. Ribeiro (12418530) Massimo Mastrangeli (1727749) Robert Passier (206087) |
| author_role | author |
| dc.creator.none.fl_str_mv | José M. Rivera-Arbeláez (12418512) Milica Dostanić (20721654) Laura M. Windt (20721657) Jeroen M. Stein (20721660) Carla Cofiño-Fabres (12418515) Tom Boonen (12418521) Maury Wiendels (9728419) Albert van den Berg (451916) Loes I. Segerink (6469727) Christine L. Mummery (206109) Pasqualina M. Sarro (12467704) Berend J. van Meer (20721663) Marcelo C. Ribeiro (12418530) Massimo Mastrangeli (1727749) Robert Passier (206087) |
| dc.date.none.fl_str_mv | 2025-02-13T19:00:28Z |
| dc.identifier.none.fl_str_mv | 10.1371/journal.pone.0314985.g002 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/figure/Algorithm_detection_steps_/28414014 |
| dc.rights.none.fl_str_mv | CC BY 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Biophysics Biotechnology Developmental Biology Space Science Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified Information Systems not elsewhere classified shown great potential pillars ’ tips manual measurements using large data sets elastic pillars induced two eht platforms thus hamper head rectangular pillar shapes recapitulating tissue organization determined via comparison common incidental defects broad research community analyzing contractile properties different research groups different eht platforms multiple eht platforms div >< p tissue contractile properties computationally efficient software engineered heart tissues eht platforms head comparison common shapes different applications tissue function multiple formats fundamental research facilitate research contractile tissues contractile performance contractile force human heart 3d heart efficient analysis vitro </ various conditions tissue shape threading approach successfully tested software imagej software efficiency reproducible performance optically tracking obtain information model output maturation level main hallmarks independent software drug discovery disease modelling disease modeling analyze circular air bubbles |
| dc.title.none.fl_str_mv | Algorithm detection steps. |
| dc.type.none.fl_str_mv | Image Figure info:eu-repo/semantics/publishedVersion image |
| description | <p>(A) Original image of Ribeiro et al’s (top) and Dostanic et al.’s platforms (bottom). (B) Image processing. The images are converted to grayscale, processed by the bilateral filter and lastly by complementary morphological transformations (erosion and dilation). Then, thresholding step of combining binarization and contour detection. (C) Tracking of the pillars from both platforms (light blue contours).</p> |
| eu_rights_str_mv | openAccess |
| id | Manara_dc3256d0a829ff0387da8693cd268ee2 |
| identifier_str_mv | 10.1371/journal.pone.0314985.g002 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/28414014 |
| publishDate | 2025 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY 4.0 |
| spelling | Algorithm detection steps.José M. Rivera-Arbeláez (12418512)Milica Dostanić (20721654)Laura M. Windt (20721657)Jeroen M. Stein (20721660)Carla Cofiño-Fabres (12418515)Tom Boonen (12418521)Maury Wiendels (9728419)Albert van den Berg (451916)Loes I. Segerink (6469727)Christine L. Mummery (206109)Pasqualina M. Sarro (12467704)Berend J. van Meer (20721663)Marcelo C. Ribeiro (12418530)Massimo Mastrangeli (1727749)Robert Passier (206087)BiophysicsBiotechnologyDevelopmental BiologySpace ScienceBiological Sciences not elsewhere classifiedChemical Sciences not elsewhere classifiedInformation Systems not elsewhere classifiedshown great potentialpillars ’ tipsmanual measurements usinglarge data setselastic pillars inducedtwo eht platformsthus hamper headrectangular pillar shapesrecapitulating tissue organizationdetermined via comparisoncommon incidental defectsbroad research communityanalyzing contractile propertiesdifferent research groupsdifferent eht platformsmultiple eht platformsdiv >< ptissue contractile propertiescomputationally efficient softwareengineered heart tissueseht platformshead comparisoncommon shapesdifferent applicationstissue functionmultiple formatsfundamental researchfacilitate researchcontractile tissuescontractile performancecontractile forcehuman heart3d heartefficient analysisvitro </various conditionstissue shapethreading approachsuccessfully testedsoftware imagejsoftware efficiencyreproducible performanceoptically trackingobtain informationmodel outputmaturation levelmain hallmarksindependent softwaredrug discoverydisease modellingdisease modelinganalyze circularair bubbles<p>(A) Original image of Ribeiro et al’s (top) and Dostanic et al.’s platforms (bottom). (B) Image processing. The images are converted to grayscale, processed by the bilateral filter and lastly by complementary morphological transformations (erosion and dilation). Then, thresholding step of combining binarization and contour detection. (C) Tracking of the pillars from both platforms (light blue contours).</p>2025-02-13T19:00:28ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1371/journal.pone.0314985.g002https://figshare.com/articles/figure/Algorithm_detection_steps_/28414014CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/284140142025-02-13T19:00:28Z |
| spellingShingle | Algorithm detection steps. José M. Rivera-Arbeláez (12418512) Biophysics Biotechnology Developmental Biology Space Science Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified Information Systems not elsewhere classified shown great potential pillars ’ tips manual measurements using large data sets elastic pillars induced two eht platforms thus hamper head rectangular pillar shapes recapitulating tissue organization determined via comparison common incidental defects broad research community analyzing contractile properties different research groups different eht platforms multiple eht platforms div >< p tissue contractile properties computationally efficient software engineered heart tissues eht platforms head comparison common shapes different applications tissue function multiple formats fundamental research facilitate research contractile tissues contractile performance contractile force human heart 3d heart efficient analysis vitro </ various conditions tissue shape threading approach successfully tested software imagej software efficiency reproducible performance optically tracking obtain information model output maturation level main hallmarks independent software drug discovery disease modelling disease modeling analyze circular air bubbles |
| status_str | publishedVersion |
| title | Algorithm detection steps. |
| title_full | Algorithm detection steps. |
| title_fullStr | Algorithm detection steps. |
| title_full_unstemmed | Algorithm detection steps. |
| title_short | Algorithm detection steps. |
| title_sort | Algorithm detection steps. |
| topic | Biophysics Biotechnology Developmental Biology Space Science Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified Information Systems not elsewhere classified shown great potential pillars ’ tips manual measurements using large data sets elastic pillars induced two eht platforms thus hamper head rectangular pillar shapes recapitulating tissue organization determined via comparison common incidental defects broad research community analyzing contractile properties different research groups different eht platforms multiple eht platforms div >< p tissue contractile properties computationally efficient software engineered heart tissues eht platforms head comparison common shapes different applications tissue function multiple formats fundamental research facilitate research contractile tissues contractile performance contractile force human heart 3d heart efficient analysis vitro </ various conditions tissue shape threading approach successfully tested software imagej software efficiency reproducible performance optically tracking obtain information model output maturation level main hallmarks independent software drug discovery disease modelling disease modeling analyze circular air bubbles |