Classification of Udai21 and the World Rice Core Collection based on organelle genome data.
<p>Dendrograms are based on plastid (a) and mitochondrion (b).</p>
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2025
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| _version_ | 1849927626814128128 |
|---|---|
| author | Hiroki Ikeda (510280) |
| author2 | Masatsugu Tamura (22683631) Takayuki Ohnishi (816437) Kenta Shirasawa (586327) |
| author2_role | author author author |
| author_facet | Hiroki Ikeda (510280) Masatsugu Tamura (22683631) Takayuki Ohnishi (816437) Kenta Shirasawa (586327) |
| author_role | author |
| dc.creator.none.fl_str_mv | Hiroki Ikeda (510280) Masatsugu Tamura (22683631) Takayuki Ohnishi (816437) Kenta Shirasawa (586327) |
| dc.date.none.fl_str_mv | 2025-11-25T18:39:09Z |
| dc.identifier.none.fl_str_mv | 10.1371/journal.pone.0324304.g005 |
| dc.relation.none.fl_str_mv | https://figshare.com/articles/figure/Classification_of_Udai21_and_the_World_Rice_Core_Collection_based_on_organelle_genome_data_/30714739 |
| dc.rights.none.fl_str_mv | CC BY 4.0 info:eu-repo/semantics/openAccess |
| dc.subject.none.fl_str_mv | Genetics Evolutionary Biology Ecology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified sampling two breeder oryza sativa </ likely parental origins impact variants relative annotate predicted impacts 522 predicted genes superior eating quality excellent eating quality distinctive quality traits carried introgressed aus div >< p curated genome resource aus maternal origin rice </ p aus × koshihikari organelle genome analysis grain quality aus cluster wide analysis rice (< organelle single hybrid origin breeding origin genome resequencing world ’ trace ancestry storage performance starch metabolism results support representative accessions previously designated paternal contribution market value map polymorphisms maintained lines l .) informed crossing identified 1 genomic composition genetic basis enable marker derived segments cultivar uniformity conducted whole chromosomes 1 candidate loci assisted selection assessed within among 37 also referred |
| dc.title.none.fl_str_mv | Classification of Udai21 and the World Rice Core Collection based on organelle genome data. |
| dc.type.none.fl_str_mv | Image Figure info:eu-repo/semantics/publishedVersion image |
| description | <p>Dendrograms are based on plastid (a) and mitochondrion (b).</p> |
| eu_rights_str_mv | openAccess |
| id | Manara_e1295976d38d661712e879c058844204 |
| identifier_str_mv | 10.1371/journal.pone.0324304.g005 |
| network_acronym_str | Manara |
| network_name_str | ManaraRepo |
| oai_identifier_str | oai:figshare.com:article/30714739 |
| publishDate | 2025 |
| repository.mail.fl_str_mv | |
| repository.name.fl_str_mv | |
| repository_id_str | |
| rights_invalid_str_mv | CC BY 4.0 |
| spelling | Classification of Udai21 and the World Rice Core Collection based on organelle genome data.Hiroki Ikeda (510280)Masatsugu Tamura (22683631)Takayuki Ohnishi (816437)Kenta Shirasawa (586327)GeneticsEvolutionary BiologyEcologyEnvironmental Sciences not elsewhere classifiedBiological Sciences not elsewhere classifiedsampling two breederoryza sativa </likely parental originsimpact variants relativeannotate predicted impacts522 predicted genessuperior eating qualityexcellent eating qualitydistinctive quality traitscarried introgressed ausdiv >< pcurated genome resourceaus maternal originrice </ paus × koshihikariorganelle genome analysisgrain qualityaus clusterwide analysisrice (<organelle singlehybrid originbreeding origingenome resequencingworld ’trace ancestrystorage performancestarch metabolismresults supportrepresentative accessionspreviously designatedpaternal contributionmarket valuemap polymorphismsmaintained linesl .)informed crossingidentified 1genomic compositiongenetic basisenable markerderived segmentscultivar uniformityconducted wholechromosomes 1candidate lociassisted selectionassessed withinamong 37also referred<p>Dendrograms are based on plastid (a) and mitochondrion (b).</p>2025-11-25T18:39:09ZImageFigureinfo:eu-repo/semantics/publishedVersionimage10.1371/journal.pone.0324304.g005https://figshare.com/articles/figure/Classification_of_Udai21_and_the_World_Rice_Core_Collection_based_on_organelle_genome_data_/30714739CC BY 4.0info:eu-repo/semantics/openAccessoai:figshare.com:article/307147392025-11-25T18:39:09Z |
| spellingShingle | Classification of Udai21 and the World Rice Core Collection based on organelle genome data. Hiroki Ikeda (510280) Genetics Evolutionary Biology Ecology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified sampling two breeder oryza sativa </ likely parental origins impact variants relative annotate predicted impacts 522 predicted genes superior eating quality excellent eating quality distinctive quality traits carried introgressed aus div >< p curated genome resource aus maternal origin rice </ p aus × koshihikari organelle genome analysis grain quality aus cluster wide analysis rice (< organelle single hybrid origin breeding origin genome resequencing world ’ trace ancestry storage performance starch metabolism results support representative accessions previously designated paternal contribution market value map polymorphisms maintained lines l .) informed crossing identified 1 genomic composition genetic basis enable marker derived segments cultivar uniformity conducted whole chromosomes 1 candidate loci assisted selection assessed within among 37 also referred |
| status_str | publishedVersion |
| title | Classification of Udai21 and the World Rice Core Collection based on organelle genome data. |
| title_full | Classification of Udai21 and the World Rice Core Collection based on organelle genome data. |
| title_fullStr | Classification of Udai21 and the World Rice Core Collection based on organelle genome data. |
| title_full_unstemmed | Classification of Udai21 and the World Rice Core Collection based on organelle genome data. |
| title_short | Classification of Udai21 and the World Rice Core Collection based on organelle genome data. |
| title_sort | Classification of Udai21 and the World Rice Core Collection based on organelle genome data. |
| topic | Genetics Evolutionary Biology Ecology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified sampling two breeder oryza sativa </ likely parental origins impact variants relative annotate predicted impacts 522 predicted genes superior eating quality excellent eating quality distinctive quality traits carried introgressed aus div >< p curated genome resource aus maternal origin rice </ p aus × koshihikari organelle genome analysis grain quality aus cluster wide analysis rice (< organelle single hybrid origin breeding origin genome resequencing world ’ trace ancestry storage performance starch metabolism results support representative accessions previously designated paternal contribution market value map polymorphisms maintained lines l .) informed crossing identified 1 genomic composition genetic basis enable marker derived segments cultivar uniformity conducted whole chromosomes 1 candidate loci assisted selection assessed within among 37 also referred |