Snapshot showing cholesterol contacts with the N-terminus of p2 and H2 and H3 of p1 in the <i>Surface</i> model.

Snapshot showing cholesterol contacts with the N-terminus of p2 and H2 and H3 of p1 in the <i>Surface</i> model.

<p>Lipid phosphorus atoms are shown in green as reference, the rest of the lipid structure, water, and ions are hidden for clarity. Proteins differentiated in pink and ice-blue, with the N-terminus end indicated with van der Waal representation. Non-polar and polar protein residues in white an...

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Príomhchruthaitheoir:	Oluwatoyin Campbell (14392137) (author)
Rannpháirtithe:	Dina Dahhan (22683620) (author), Viviana Monje (2056069) (author)
Foilsithe / Cruthaithe:	2025
Ábhair:	Biophysics Biochemistry Cell Biology Genetics Molecular Biology Biotechnology Cancer Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified Physical Sciences not elsewhere classified Information Systems not elsewhere classified process may help complex transmembrane topology comparing dimer interactions aqueous solution versus promote p7 oligomerization protein residue alignment p7 dimers driven alignment underlie health study demonstrates particularly involving often composed molecular mechanisms key residues hydrophobic contacts hydrogen bonding first helix explain assembly dynamic contributors channel assembly
Clibeanna:	Cuir clib leis Níl clibeanna ann, Bí ar an gcéad duine le clib a chur leis an taifead seo!

Míreanna comhchosúla

RMSF per residue in individual p7 monomers for each <i>Sep</i> and <i>Surface</i> model replicas.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Distance of each amino acid from the average position of phosphorus atoms in the contacting membrane leaflet in the <i>Surface</i> systems.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Tilt angle conformational landscapes of residues involved in 1-to-1 helix contacts during the last 500 ns of trajectory in the <i>Surface</i> model.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Tilt angle conformational landscapes of residues involved in 1-to-1 helix contacts during the last 200 ns of trajectory in the <i>Sep</i> model.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Residue contact comparison with reference dimer structure.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Suggested mechanism of p7 dimerization at the ER membrane surface, based on results from this study.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Protein-lipid interactions in the <i>Surface</i> model.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Correlation of protein and lipid motions in the <i>Surface</i> model.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Initial positioning of monomers in replicas 1, 2, 3 and 4 of <i>Surface</i> model.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Protein-lipid dynamic cross correlation maps for <i>Surface</i> replicas 2 and 4 during the entire trajectory.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Frequency of hydrogen bonds between individual residues and lipid species during the last half of trajectory (500 ns) in the <i>Surface</i> model.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Deviations of the <i>Bound</i> model protein dimer conformation from the reference crystal structure of the channel (PDBID: 2M6X).
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Energetics of protein interactions.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Protein conformational dynamics induced by presence of a lipid membrane.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Initial simulation coordinates.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Coulomb (electrostatic), Lennard-Jones (hydrophobic), and total interaction energy of interacting monomer helices in each model.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Surface replica 4 structural evaluation.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Root mean square deviation measurements of monomers.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

List of protein residues and selected atoms to define the tilt angle vectors.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Description of systems studied.
de réir: Oluwatoyin Campbell (14392137)
Foilsithe / Cruthaithe: (2025)

Structural Evidence of Interanionic Hydrogen Bonding in Phosphoric Acid Solutions
de réir: Pyeongeun Kim (9509954)
Foilsithe / Cruthaithe: (2025)

Distribution of norovirus genotypes and P-types detected in patients with acute gastroenteritis attending two hospitals in Thailand.
de réir: Leera Kittigul (22676501)
Foilsithe / Cruthaithe: (2025)

Nitrocefin and p-nitrophenyl butyrate hydrolysis assays for Pseudomonas <i>aeruginosa</i> TesA.
de réir: Martin B. L. McAndrew (22683641)
Foilsithe / Cruthaithe: (2025)

pH and ORP profiles and stability of EBL.
de réir: Zhuangbin Zheng (22676304)
Foilsithe / Cruthaithe: (2025)

A Series of Experiments on Criticality and Reflector Reactivity Worth in FCA-XXIII-1 and FCA-XXIV-1 Assemblies Simulating a Small Fast Reactor with a Thick Stainless Steel Reflector
de réir: Masahiro Fukushima (2249263)
Foilsithe / Cruthaithe: (2025)

Coevolving residue pairs mapped to the YbbP-TesA interface.
de réir: Martin B. L. McAndrew (22683641)
Foilsithe / Cruthaithe: (2025)

Transfer task (pre- and post-test) design and information alignment.
de réir: Denise Moerel (9080849)
Foilsithe / Cruthaithe: (2025)

The contribution of shared rules to neural information alignment, for the first (A) and second (B) experiment half.
de réir: Denise Moerel (9080849)
Foilsithe / Cruthaithe: (2025)

The time-course of information alignment, split by first and second experiment half.
de réir: Denise Moerel (9080849)
Foilsithe / Cruthaithe: (2025)

The time-course of information alignment.
de réir: Denise Moerel (9080849)
Foilsithe / Cruthaithe: (2025)

Information alignment between the two individuals in each pair.
de réir: Denise Moerel (9080849)
Foilsithe / Cruthaithe: (2025)

Stimuli, experiment procedure, and behavioral results.
de réir: Denise Moerel (9080849)
Foilsithe / Cruthaithe: (2025)

p-Nitrophenyl butyrate hydrolysis data underpinning Fig 4A in Excel format.
de réir: Martin B. L. McAndrew (22683641)
Foilsithe / Cruthaithe: (2025)

Contact propensity data underpinning S9 Fig in Excel format.
de réir: Martin B. L. McAndrew (22683641)
Foilsithe / Cruthaithe: (2025)

Human Values, Purpose & Meaning 2025 (Dataset)
de réir: Human Clarity Institute (22464229)
Foilsithe / Cruthaithe: (2025)

Effects of the inclusion of selected types of dietary fat in broiler chicken diets on the gastrointestinal tract pH.
de réir: Muhammad Rumman Aslam (22683482)
Foilsithe / Cruthaithe: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
de réir: Neval Yilmaz (1544557)
Foilsithe / Cruthaithe: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
de réir: Neval Yilmaz (1544557)
Foilsithe / Cruthaithe: (2025)

Ligand Binding to the Membrane-Distal Domain of the Met Receptor Induces Dimerization at the Membrane-Proximal Domain
de réir: Neval Yilmaz (1544557)
Foilsithe / Cruthaithe: (2025)

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