Supplementary Table 4_Marker genes all and some per cluster_GO and curated pathways per cluster from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer

Supplementary Table 4_Marker genes all and some per cluster_GO and curated pathways per cluster from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer

<p>Supplementary Table including Marker genes (ALL and SOME settings) per cluster and GO and curated pathways per cluster</p>

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Bibliografische gegevens
Hoofdauteur:	Niccolò Roda (16437288) (author)
Andere auteurs:	Andrea Cossa (16437291) (author), Roman Hillje (14946571) (author), Andrea Tirelli (16437294) (author), Federica Ruscitto (16437297) (author), Stefano Cheloni (16437300) (author), Chiara Priami (16437303) (author), Alberto Dalmasso (16437306) (author), Valentina Gambino (16437309) (author), Giada Blandano (16437312) (author), Andrea Polazzi (16437315) (author), Paolo Falvo (14946568) (author), Elena Gatti (10054266) (author), Luca Mazzarella (16437318) (author), Lucilla Luzi (16437321) (author), Enrica Migliaccio (16437324) (author), Pier Giuseppe Pelicci (16437327) (author)
Gepubliceerd in:	2025
Onderwerpen:	Cancer Tumor Biology Breast Cancer Progression, Invasion & Metastasis Tumor progression Tumor Evolution Tumor Heterogeneity
Tags:	Voeg label toe Geen labels, Wees de eerste die dit record labelt!

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Supplementary Table 5_Marker genes all and some per cluster no cell cycle_GO and curated pathways per cluster no cell cycle from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer
door: Niccolò Roda (16437288)
Gepubliceerd in: (2025)

Supplementary Table 6_Gene modules analysis_GO and curated pathways associated to gene modules from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer
door: Niccolò Roda (16437288)
Gepubliceerd in: (2025)

Supplementary Table 3_Clonal distribution analysis from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer
door: Niccolò Roda (16437288)
Gepubliceerd in: (2025)

Supplementary Table 10_Pro metastatic pathways identified by classification analysis from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer
door: Niccolò Roda (16437288)
Gepubliceerd in: (2025)

Supplementary Table 1_Primer and shRNA sequences_PCR cycles_Mycoplasma testing from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer
door: Niccolò Roda (16437288)
Gepubliceerd in: (2025)

Supplementary Table 2_Predictive power of genes and signatures_Patient cohorts GEO accession number from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer
door: Niccolò Roda (16437288)
Gepubliceerd in: (2025)

Supplementary Table 8_Genes identified by classification analysis in pro vs non metastatic clones from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer
door: Niccolò Roda (16437288)
Gepubliceerd in: (2025)

Supplementary Table 9_Pro metastatic pathways identified by differential expression singlePT setting from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer
door: Niccolò Roda (16437288)
Gepubliceerd in: (2025)

Supplementary Table 7_Genes identified by differential expression analysis in pro vs non metastatic clones from A Rare Subset of Primary Tumor Cells with Concomitant Hyperactivation of Extracellular Matrix Remodeling and dsRNA-IFN1 Signaling Metastasizes in Breast Cancer
door: Niccolò Roda (16437288)
Gepubliceerd in: (2025)

Supplementary Table 1 from Spatial Transcriptomics Depict Ligand–Receptor Cross-talk Heterogeneity at the Tumor-Stroma Interface in Long-Term Ovarian Cancer Survivors
door: Sammy Ferri-Borgogno (15307295)
Gepubliceerd in: (2025)

Supplementary Table 2 from Spatial Transcriptomics Depict Ligand–Receptor Cross-talk Heterogeneity at the Tumor-Stroma Interface in Long-Term Ovarian Cancer Survivors
door: Sammy Ferri-Borgogno (15307295)
Gepubliceerd in: (2025)

Supplementary Table 3 from Spatial Transcriptomics Depict Ligand–Receptor Cross-talk Heterogeneity at the Tumor-Stroma Interface in Long-Term Ovarian Cancer Survivors
door: Sammy Ferri-Borgogno (15307295)
Gepubliceerd in: (2025)

Supplementary Table 4 from Spatial Transcriptomics Depict Ligand–Receptor Cross-talk Heterogeneity at the Tumor-Stroma Interface in Long-Term Ovarian Cancer Survivors
door: Sammy Ferri-Borgogno (15307295)
Gepubliceerd in: (2025)

Supplementary Figure 1 from Molecular Clusters and Tumor-Immune Drivers of IgM Monoclonal Gammopathies
door: Patrizia Mondello (15045002)
Gepubliceerd in: (2025)

Supplementary Figure 2 from Molecular Clusters and Tumor-Immune Drivers of IgM Monoclonal Gammopathies
door: Patrizia Mondello (15045002)
Gepubliceerd in: (2025)

Supplementary Figure 3 from Molecular Clusters and Tumor-Immune Drivers of IgM Monoclonal Gammopathies
door: Patrizia Mondello (15045002)
Gepubliceerd in: (2025)

Supplementary Figure 4 from Molecular Clusters and Tumor-Immune Drivers of IgM Monoclonal Gammopathies
door: Patrizia Mondello (15045002)
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Supplementary Figure 5 from Molecular Clusters and Tumor-Immune Drivers of IgM Monoclonal Gammopathies
door: Patrizia Mondello (15045002)
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Supplementary Figure 6 from Molecular Clusters and Tumor-Immune Drivers of IgM Monoclonal Gammopathies
door: Patrizia Mondello (15045002)
Gepubliceerd in: (2025)

Supplementary Figure 7 from Molecular Clusters and Tumor-Immune Drivers of IgM Monoclonal Gammopathies
door: Patrizia Mondello (15045002)
Gepubliceerd in: (2025)

Supplementary Figure 8 from Molecular Clusters and Tumor-Immune Drivers of IgM Monoclonal Gammopathies
door: Patrizia Mondello (15045002)
Gepubliceerd in: (2025)

Supplementary Figure 9 from Molecular Clusters and Tumor-Immune Drivers of IgM Monoclonal Gammopathies
door: Patrizia Mondello (15045002)
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Supp. Figure 1 from Parkin Deficiency Suppresses Antigen Presentation to Promote Tumor Immune Evasion and Immunotherapy Resistance
door: Renzo Perales-Linares (17314863)
Gepubliceerd in: (2025)

Supp. Figure 2 from Parkin Deficiency Suppresses Antigen Presentation to Promote Tumor Immune Evasion and Immunotherapy Resistance
door: Renzo Perales-Linares (17314863)
Gepubliceerd in: (2025)

Supp. Figure 3 from Parkin Deficiency Suppresses Antigen Presentation to Promote Tumor Immune Evasion and Immunotherapy Resistance
door: Renzo Perales-Linares (17314863)
Gepubliceerd in: (2025)

Supp. Figure 4 from Parkin Deficiency Suppresses Antigen Presentation to Promote Tumor Immune Evasion and Immunotherapy Resistance
door: Renzo Perales-Linares (17314863)
Gepubliceerd in: (2025)

Supp. Figure 5 from Parkin Deficiency Suppresses Antigen Presentation to Promote Tumor Immune Evasion and Immunotherapy Resistance
door: Renzo Perales-Linares (17314863)
Gepubliceerd in: (2025)

Supp. Figure 6 from Parkin Deficiency Suppresses Antigen Presentation to Promote Tumor Immune Evasion and Immunotherapy Resistance
door: Renzo Perales-Linares (17314863)
Gepubliceerd in: (2025)

Supplementary Table 1 - Gene Expression from Parkin Deficiency Suppresses Antigen Presentation to Promote Tumor Immune Evasion and Immunotherapy Resistance
door: Renzo Perales-Linares (17314863)
Gepubliceerd in: (2025)

Supplementary Table 1 from <i>N<sup>6</sup></i>-Methyladenosine Promotes Translation of VEGFA to Accelerate Angiogenesis in Lung Cancer
door: Haisheng Zhang (16436982)
Gepubliceerd in: (2025)

Supplementary Tables from Large B-cell Lymphomas of Immune-Privileged Sites Relapse via Parallel Clonal Evolution from a Common Progenitor B Cell
door: G. Tjitske Los-de Vries (15618987)
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Supplementary Figure S1 from G-CSF Is a Novel Mediator of T-Cell Suppression and an Immunotherapeutic Target for Women with Colon Cancer
door: Anita L. Ray (15313398)
Gepubliceerd in: (2025)

Supplementary Figure S2 from G-CSF Is a Novel Mediator of T-Cell Suppression and an Immunotherapeutic Target for Women with Colon Cancer
door: Anita L. Ray (15313398)
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Supplementary Table 1 from Apolipoprotein E2 Stimulates Protein Synthesis and Promotes Melanoma Progression and Metastasis
door: Nneoma Adaku (16991063)
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Supplementary Table 2 from Apolipoprotein E2 Stimulates Protein Synthesis and Promotes Melanoma Progression and Metastasis
door: Nneoma Adaku (16991063)
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Supplementary Table 3 from Apolipoprotein E2 Stimulates Protein Synthesis and Promotes Melanoma Progression and Metastasis
door: Nneoma Adaku (16991063)
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Supplementary Data from Active Remodeling of Capillary Endothelium via Cancer Cell–Derived MMP9 Promotes Metastatic Brain Colonization
door: Matthia A. Karreman (15097355)
Gepubliceerd in: (2025)

Supplementary Data from Active Remodeling of Capillary Endothelium via Cancer Cell–Derived MMP9 Promotes Metastatic Brain Colonization
door: Matthia A. Karreman (15097355)
Gepubliceerd in: (2025)

Supplementary Data from Active Remodeling of Capillary Endothelium via Cancer Cell–Derived MMP9 Promotes Metastatic Brain Colonization
door: Matthia A. Karreman (15097355)
Gepubliceerd in: (2025)

Supplementary Data from Active Remodeling of Capillary Endothelium via Cancer Cell–Derived MMP9 Promotes Metastatic Brain Colonization
door: Matthia A. Karreman (15097355)
Gepubliceerd in: (2025)

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