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python function » protein function (توسيع البحث)
algorithm step » algorithm steps (توسيع البحث), algorithm used (توسيع البحث), algorithm etc (توسيع البحث)
step function » system function (توسيع البحث), islet function (توسيع البحث), its function (توسيع البحث)
algorithm python » algorithm within (توسيع البحث), algorithms within (توسيع البحث), algorithm both (توسيع البحث)
python function » protein function (توسيع البحث)
algorithm step » algorithm steps (توسيع البحث), algorithm used (توسيع البحث), algorithm etc (توسيع البحث)
step function » system function (توسيع البحث), islet function (توسيع البحث), its function (توسيع البحث)
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FAR-1: A Fast Integer Reduction Algorithm Compared to Collatz and Half-Collatz
منشور في 2025الموضوعات: -
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Python implementation of the Trajectory Adaptive Multilevel Sampling algorithm for rare events and improvements
منشور في 2021"…In `main.py`, the parameters for the TAMS algorithm are specified (trajectory time, time step, score function, number of particles, type of score threshold, maximum number of iterations, noise level etc.). …"
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BOFdat: Generating biomass objective functions for genome-scale metabolic models from experimental data
منشور في 2019"…Despite its importance, no standardized computational platform is currently available to generate species-specific biomass objective functions in a data-driven, unbiased fashion. To fill this gap in the metabolic modeling software ecosystem, we implemented BOFdat, a Python package for the definition of a <b>B</b>iomass <b>O</b>bjective <b>F</b>unction from experimental <b>dat</b>a. …"
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Multidomain, Automated Photopatterning of DNA-functionalized Hydrogels (MAPDH).
منشور في 2024"…The algorithm incorporates a wash step between each round of patterning. …"
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Algoritmo de clasificación de expresiones de odio por tipos en español (Algorithm for classifying hate expressions by type in Spanish)
منشور في 2024"…</p><h2>Model Architecture</h2><p dir="ltr">The model is based on <code>pysentimiento/robertuito-base-uncased</code> with the following modifications:</p><ul><li>A dense classification layer was added over the base model</li><li>Uses input IDs and attention masks as inputs</li><li>Generates a multi-class classification with 5 hate categories</li></ul><h2>Dataset</h2><p dir="ltr"><b>HATEMEDIA Dataset</b>: Custom hate speech dataset with categorization by type:</p><ul><li><b>Labels</b>: 5 hate type categories (0-4)</li><li><b>Preprocessing</b>:</li><li>Null values removed from text and labels</li><li>Reindexing and relabeling (original labels are adjusted by subtracting 1)</li><li>Exclusion of category 2 during training</li><li>Conversion of category 5 to category 2</li></ul><h2>Training Process</h2><h3>Configuration</h3><ul><li><b>Batch size</b>: 128</li><li><b>Epoches</b>: 5</li><li><b>Learning rate</b>: 2e-5 with 10% warmup steps</li><li><b>Early stopping</b> with patience=2</li><li><b>Class weights</b>: Balanced to handle class imbalance</li></ul><h3>Custom Metrics</h3><ul><li>Recall for specific classes (focus on class 2)</li><li>Precision for specific classes (focus on class 3)</li><li>F1-score (weighted)</li><li>AUC-PR</li><li>Recall at precision=0.6 (class 3)</li><li>Precision at recall=0.6 (class 2)</li></ul><h2>Evaluation Metrics</h2><p dir="ltr">The model is evaluated using:</p><ul><li>Macro recall, precision, and F1-score</li><li>One-vs-Rest AUC</li><li>Accuracy</li><li>Per-class metrics</li><li>Confusion matrix</li><li>Full classification report</li></ul><h2>Technical Features</h2><h3>Data Preprocessing</h3><ul><li><b>Tokenization</b>: Maximum length of 128 tokens (truncation and padding)</li><li><b>Encoding of labels</b>: One-hot encoding for multi-class classification</li><li><b>Data split</b>: 80% training, 10% validation, 10% testing</li></ul><h3>Optimization</h3><ul><li><b>Optimizer</b>: Adam with linear warmup scheduling</li><li><b>Loss function</b>: Categorical Crossentropy (from_logits=True)</li><li><b>Imbalance handling</b>: Class weights computed automatically</li></ul><h2>Requirements</h2><p dir="ltr">The following Python packages are required:</p><ul><li>TensorFlow</li><li>Transformers</li><li>scikit-learn</li><li>pandas</li><li>datasets</li><li>matplotlib</li><li>seaborn</li><li>numpy</li></ul><h2>Usage</h2><ol><li><b>Data format</b>:</li></ol><ul><li>CSV file or Pandas DataFrame</li><li>Required column name: <code>text</code> (string type)</li><li>Required column name: Data type label (integer type, 0-4) - optional for evaluation</li></ul><ol><li><b>Text preprocessing</b>:</li></ol><ul><li>Automatic tokenization with a maximum length of 128 tokens</li><li>Long texts will be automatically truncated</li><li>Handling of special characters, URLs, and emojis included</li></ul><ol><li><b>Label encoding</b>:</li></ol><ul><li>The model classifies hate speech into 5 categories (0-4)</li><li><code>0</code>: Political hatred: Expressions directed against individuals or groups based on political orientation.…"
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Data_Sheet_1_Processing Pipeline for Atlas-Based Imaging Data Analysis of Structural and Functional Mouse Brain MRI (AIDAmri).docx
منشور في 2019"…Following a modular structure developed in Python scripting language, the pipeline integrates established and newly developed algorithms. …"
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Data_Sheet_2_Processing Pipeline for Atlas-Based Imaging Data Analysis of Structural and Functional Mouse Brain MRI (AIDAmri).pdf
منشور في 2019"…Following a modular structure developed in Python scripting language, the pipeline integrates established and newly developed algorithms. …"
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Map Matching on Low Sampling Rate Trajectories Through Deep Inverse Reinforcement Learning and Multi Intention Modeling
منشور في 2024"…</li><li>`plots`: Contains functions for generating plots.</li><li>`MIDIRL_MapMatching.ipynb`: Includes step-by-step instructions for training the model, testing it on sample data, visualizing the results, and evaluating its performance. …"
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Code and Data for 'Fabrication and testing of lensed fiber optic probes for distance sensing using common path low coherence interferometry'
منشور في 2025"…Distance Sensing</p><p dir="ltr">Code and data to demonstrate extracting distance sensing data from A-scans and to generate Fig. 8 using the algorithm described in Fig. 7. Functions to generate distance measurements are in 'distance_sensing_utilities.py' and an example of how to use this on data in the 'data' folder is in 'distance_sensing_example.py', which generates Fig 8. …"
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GameOfLife Prediction Dataset
منشور في 2025"…This task is relatively simple for a human to do if a bit tedious, and should theoretically be simple for Machine Learning algorithms. Each cells's state is calculated based off the number of alive neighbour's in the previous step. …"