Evolutionary algorithm for protein structure prediction by Mansour, Nashat

“…A protein is characterized by its 3D structure, which defines its biological function. …”
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Scatter search for protein structure prediction. (c2008) by Kehyayan, Christine Houry

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Computational evluation of protein energy functions by Mansour, Nashat

“…A protein is characterized by its 3D structure, which defines its biological function. …”
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Particle swarm optimization based algorithm for protein structure prediction in the 3D HP model. (c2008) by Kanj, Fatima Hassan

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Scatter Search algorithm for Protein Structure Prediction by Mansour, Nashat

“…Given the protein's sequence of Amino Acids (AAs), our algorithm produces a 3D structure that aims to minimise the energy function associated with the structure. …”
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Improved scatter search algorithm for predicting all-atoms protein structures using charmm22 energy model. (c2010) by Ghalayini, Iman Adnan

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Evolutionary algorithm for predicting all-atom protein structure by Mansour, Nashat

“…This algorithm produces a 3D structure of the whole protein, including back-bone and side-chain atoms, by minimizing the energy function associated with the structure. …”
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Improved prairie dog optimization algorithm by dwarf mongoose optimization algorithm for optimization problems by Abualigah, Laith

“…In this paper, a novel hybrid optimization algorithm is proposed to solve various benchmark functions, which is called IPDOA. …”
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Detecting protein complexes in protein interaction networks using Mapper and Graph Convolution Networks by Daou, Leonardo

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Consensus-Based Distributed Formation Control of Multi-Quadcopter Systems: Barrier Lyapunov Function Approach by Nargess Sadeghzadeh-Nokhodberiz (16904952)

“…The method is firstly developed in a centralized scheme and then extended to a distributed framework using appropriate asymptotically convergent consensus algorithms. Therefore, the asymptotic convergence of the designed distributed algorithm to the centralized one is guaranteed. …”

Design and Implementation of an Advanced Control and Guidance Algorithm of a Single Rotor Helicopter by Al-Omari, Muhannad A. R. I.

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Accommodating High Penetrations of Renewable Distributed Generation Mix in Smart Grids by Khayata, Mohammad Tarek

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Fragment-based computational protein structure prediction by Mansour, Nashat

“…This paper presents a fragment-based protein tertiary structure prediction method which employs the CHARMM36 energy model. …”
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Fragment based protein structure prediction. (c2013) by Terzian, Meghrig Ohanes

“…The results, evaluated on three proteins, show that the algorithm produces tertiary structures with promising root mean square deviations, within reasonable times.…”
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Evolution Of Activation Functions for Neural Architecture Search by Nader, Andrew

“…However, to the best of our knowledge, the design of new activation functions has mostly been done by hand. In this work, we propose the use of a self-adaptive evolutionary algorithm that searches for new activation functions using a genetic programming approach, and we compare the performance of the obtained activation functions to ReLU. …”
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An Introduction to the Special Issue “Protein Glycation in Food, Nutrition, Health and Disease” by Naila Rabbani (291722)

“…The keynote speaker was Lasker Laureate Professor Kazutoshi Mori, speaking on the unfolded protein response, and there were sessions on: glycation in obesity, diabetes, and diabetic complications; glycation in food; glycation through the life course—from maternal bonding to aging; glycation in plants—physiology, function, and food security; glycation in the COVID-19 response; glycation analytics and chemistry; glycation in kidney disease, cancer, and mental health; glycation-related imaging, diagnostic algorithms, and therapeutics; and methods and models in glycation research. …”

Scatter search metaheuristic for homology based protein structure prediction. (c2015) by Stamboulian, Mouses Hrag

“…We assess our algorithm on a total of 11 proteins whose structures are present in the Protein Data Bank (PDB) and which has been used in previous literature. …”
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Stochastic evolution algorithm for technology mapping by Al-Mulhem, A.S.

“…SELF-Map is based on the Stochastic Evolution (SE) algorithm. The state space model of the problem is defined and suitable cost function which allows optimization for area, delay, or area-delay combinations is proposed. …”
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Evolutionary Algorithms for VLSIMultiobjective Netlist Partitioning by Sait, Sadiq M.

“…Further, we compared the results of the iterative heuristics with a modified FM algorithm, named PowerFM, which targets power optimization. …”
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AGEomics Biomarkers and Machine Learning—Realizing the Potential of Protein Glycation in Clinical Diagnostics by Naila Rabbani (291722)

“…The term AGEomics is defined as multiplexed quantitation of spontaneous modification of proteins damage and other usually low-level modifications associated with a change of structure and function—for example, citrullination and transglutamination. …”