Computational evluation of protein energy functions by Mansour, Nashat

“…A protein is characterized by its 3D structure, which defines its biological function. …”
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Evolutionary algorithm for protein structure prediction by Mansour, Nashat

“…A protein is characterized by its 3D structure, which defines its biological function. …”
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Particle swarm optimization based algorithm for protein structure prediction in the 3D HP model. (c2008) by Kanj, Fatima Hassan

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Scatter Search algorithm for Protein Structure Prediction by Mansour, Nashat

“…Given the protein's sequence of Amino Acids (AAs), our algorithm produces a 3D structure that aims to minimise the energy function associated with the structure. …”
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Evolutionary algorithm for predicting all-atom protein structure by Mansour, Nashat

“…This algorithm produces a 3D structure of the whole protein, including back-bone and side-chain atoms, by minimizing the energy function associated with the structure. …”
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AGEomics Biomarkers and Machine Learning—Realizing the Potential of Protein Glycation in Clinical Diagnostics by Naila Rabbani (291722)

“…The term AGEomics is defined as multiplexed quantitation of spontaneous modification of proteins damage and other usually low-level modifications associated with a change of structure and function—for example, citrullination and transglutamination. …”

Scatter search for protein structure prediction. (c2008) by Kehyayan, Christine Houry

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Improved scatter search algorithm for predicting all-atoms protein structures using charmm22 energy model. (c2010) by Ghalayini, Iman Adnan

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Detecting protein complexes in protein interaction networks using Mapper and Graph Convolution Networks by Daou, Leonardo

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Fragment-based computational protein structure prediction by Mansour, Nashat

“…The 3-dimensional configuration determines a protein’s function. Hence, it is very important to determine the correct structure in order to identify the wrong folding that indicates a disease situation. …”
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Fragment based protein structure prediction. (c2013) by Terzian, Meghrig Ohanes

“…The results, evaluated on three proteins, show that the algorithm produces tertiary structures with promising root mean square deviations, within reasonable times.…”
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From Collatz Conjecture to chaos and hash function by Masrat Rasool (17807813)

“…The effectiveness and dependability of the proposed hash function are evaluated by comparing it with two well-known hash algorithms, namely SHA-3 and SHA-2, as well as several other Chaos-based hash algorithms. …”

An Introduction to the Special Issue “Protein Glycation in Food, Nutrition, Health and Disease” by Naila Rabbani (291722)

“…The keynote speaker was Lasker Laureate Professor Kazutoshi Mori, speaking on the unfolded protein response, and there were sessions on: glycation in obesity, diabetes, and diabetic complications; glycation in food; glycation through the life course—from maternal bonding to aging; glycation in plants—physiology, function, and food security; glycation in the COVID-19 response; glycation analytics and chemistry; glycation in kidney disease, cancer, and mental health; glycation-related imaging, diagnostic algorithms, and therapeutics; and methods and models in glycation research. …”

Scatter search metaheuristic for homology based protein structure prediction. (c2015) by Stamboulian, Mouses Hrag

“…Determining a protein’s structure is a challenging goal in structural bioinformatics, offering important insight towards understanding the function of a protein. …”
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Particle swarm optimization approach for protein structure prediction in the 3D HP model by Mansour, Nashat

“…Proteins fold, under the influence of several chemical and physical factors, into their 3D structures, which determine their biological functions and properties. …”
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Radial basis function networks for contingency analysis of bulkpower systems by Refaee, J.A.

“…Unlike most of the available neural networks based techniques, the proposed method utilizes the potential of RBFN in planning studies. The performance of the RBFN is compared with a standard AC load flow algorithm…”
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Random vector functional link network: Recent developments, applications, and future directions by A.K. Malik (16003193)

“…Finally, we present potential future research directions/opportunities that can inspire the researchers to improve the RVFL’s architecture and learning algorithm further. …”

Blood-Based Proteomic Profiling Identifies Potential Biomarker Candidates and Pathogenic Pathways in Dementia by Hanan Ehtewish (17149825)

“…We used a high-throughput proximity extension immunoassay to quantify 1090 proteins in 122 participants (22 with dementia, 64 with mild cognitive impairment (MCI), and 36 controls with normal cognitive function). …”

Performance assessment and exhaustive listing of 500+ nature-inspired metaheuristic algorithms by Zhongqiang Ma (13765801)

“…It should be noted that, except EBCM, the other 10 new algorithms are inferior to the 4 state-of-the-art algorithms in terms of convergence speed and global search ability on CEC 2017 functions. …”

Adapted arithmetic optimization algorithm for multi-level thresholding image segmentation: a case study of chest x-ray images by Abu Zitar, Raed

“…The solutions are evaluated using Otsu's fitness function throughout the optimization process. The picture histogram is used to display the algorithm's potential solutions. …”
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