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Scatter Search algorithm for Protein Structure Prediction
Published 2016“…In this paper, we present a Scatter Search (SS) algorithm for predicting 3D structures of proteins based on torsion angles representation. …”
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Scatter search for protein structure prediction. (c2008)
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Particle swarm optimization approach for protein structure prediction in the 3D HP model
Published 2012“…Due to the importance of this problem and since laboratory techniques are not always feasible, computational methods for characterizing protein structures have been proposed. In this paper, we present a particle swarm optimization (PSO) based algorithm for predicting protein structures in the 3D hydrophobic polar model. …”
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Protein structure prediction in the 3D HP model
Published 2009“…Due to the importance of this problem and since laboratory techniques are not always feasible, computational methods for characterizing protein structures have been proposed. In this paper, we present a Particle Swarm Optimization (PSO) based algorithm for predicting protein structures in the 3D HP model. …”
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Scatter search metaheuristic for homology based protein structure prediction. (c2015)
Published 2015“…To improve homology based PSP, we propose a scatter search (SS) metaheuristic algorithm. Our algorithm optimizes the initial poor alignments, generated by a dynamic programming method. …”
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Scatter search for homology modeling
Published 2016“…We assess our algorithm on a number of proteins whose structures are present in the Protein Data Bank and which have been used in previous literature. …”
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