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  1. 1
    Proportion of genomes by year from the five critical-level priority pathogens carrying one or more AMR mechanisms for relevant antimicrobial classes, as displayed in the “AMR mechanism proportion over time” panel within amr.watch.

    Proportion of genomes by year from the five critical-level priority pathogens carrying one or more AMR mechanisms for relevant antimicrobial classes, as displayed in the “AMR mecha... av Sophia David (4172902)

    Publicerad 2025
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  2. 2
    <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respectively).

    <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025 from the USA (A) and China (B) filtered by the most frequent ST from each country (ST258 and ST11, respect... av Sophia David (4172902)

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  3. 3
    The interactive amr.watch application here shows an overview from 179,518 <i>E. coli</i> genomes available as of 31 March 2025.

    The interactive amr.watch application here shows an overview from 179,518 <i>E. coli</i> genomes available as of 31 March 2025. av Sophia David (4172902)

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  4. 4
    Curated list of AMR mechanisms by pathogen from AMRFinderPlus that are reported in amr.watch.

    Curated list of AMR mechanisms by pathogen from AMRFinderPlus that are reported in amr.watch. av Sophia David (4172902)

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  5. 5
    Distribution of pathogen genomes represented in amr.watch as of 31 March 2025.

    Distribution of pathogen genomes represented in amr.watch as of 31 March 2025. av Sophia David (4172902)

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  6. 6
    <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025, filtered by the presence of the carbapenem resistance gene, <i>bla</i><sub>NDM-5</sub>.

    <i>K. pneumoniae</i> genomes represented in amr.watch as of 31 March 2025, filtered by the presence of the carbapenem resistance gene, <i>bla</i><sub>NDM-5</sub>. av Sophia David (4172902)

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  7. 7
    Overview of the Illumina paired-end entries available in the International Nucleotide Sequence Database Collaboration (INSDC) databases as of 31 March 2025.

    Overview of the Illumina paired-end entries available in the International Nucleotide Sequence Database Collaboration (INSDC) databases as of 31 March 2025. av Sophia David (4172902)

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  8. 8
    QC thresholds applied to the public downloaded genomes.

    QC thresholds applied to the public downloaded genomes. av Sophia David (4172902)

    Publicerad 2025
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