Initial simulation coordinates. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Protein conformational dynamics induced by presence of a lipid membrane. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Coulomb (electrostatic), Lennard-Jones (hydrophobic), and total interaction energy of interacting monomer helices in each model. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Description of systems studied. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Distance of each amino acid from the average position of phosphorus atoms in the contacting membrane leaflet in the <i>Surface</i> systems. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Root mean square deviation measurements of monomers. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Residue contact comparison with reference dimer structure. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Energetics of protein interactions. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Correlation of protein and lipid motions in the <i>Surface</i> model. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Contact maps of residues during the last half of trajectory (200 ns in <i>Sep</i> and 500 ns in <i>Surface</i> model), based on a cutoff of 14 Å. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Deviations of the <i>Bound</i> model protein dimer conformation from the reference crystal structure of the channel (PDBID: 2M6X). Bằng Oluwatoyin Campbell (14392137)

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Surface replica 4 structural evaluation. Bằng Oluwatoyin Campbell (14392137)

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List of protein residues and selected atoms to define the tilt angle vectors. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Tilt angle conformational landscapes of residues involved in 1-to-1 helix contacts during the last 500 ns of trajectory in the <i>Surface</i> model. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Tilt angle conformational landscapes of residues involved in 1-to-1 helix contacts during the last 200 ns of trajectory in the <i>Sep</i> model. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Protein-lipid dynamic cross correlation maps for <i>Surface</i> replicas 2 and 4 during the entire trajectory. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Initial positioning of monomers in replicas 1, 2, 3 and 4 of <i>Surface</i> model. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

RMSF per residue in individual p7 monomers for each <i>Sep</i> and <i>Surface</i> model replicas. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Protein-lipid interactions in the <i>Surface</i> model. Bằng Oluwatoyin Campbell (14392137)

Những chủ đề:

Suggested mechanism of p7 dimerization at the ER membrane surface, based on results from this study. Bằng Oluwatoyin Campbell (14392137)

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