Erakusten 21 - 40 emaitzak -- 62 bilaketa honetara '"toxoplasma gondii </"', Bilaketaren denbora: 0,03s Findu emaitzak
  1. 21
    Epitope tagging candidate CIA pathway proteins in <i>Toxoplasma gondii.</i>

    Epitope tagging candidate CIA pathway proteins in <i>Toxoplasma gondii.</i> nork Evie R. Hodgson (21866946)

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    The effects of mutating the CD loops of <i>Tg</i>CIA1 on mitochondrial morphology and parasite proliferation.

    The effects of mutating the CD loops of <i>Tg</i>CIA1 on mitochondrial morphology and parasite proliferation. nork Evie R. Hodgson (21866946)

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    An aromatic amino acid motif in the CD5 loop of <i>Tg</i>CIA1 facilitates mitochondrial targeting.

    An aromatic amino acid motif in the CD5 loop of <i>Tg</i>CIA1 facilitates mitochondrial targeting. nork Evie R. Hodgson (21866946)

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    A. Mouse transcriptome non-negative matrix factorization component weights across all time points and conditions. Larger weight values indicate components with upregulated genes dominating. B. Gene set enrichment plot for selected features from each component in panel A. Components 1, 4, and 5 did not exhibit enrichment in these broad terms. C. Number of genes in enriched gene ontology terms related to immunity, signaling, and transcription for each time point and condition. D. Time course transcriptional profiles for mouse genes characteristic to component 3. E. PARFA-seq validation by quantitative PCR and gene expression changes during immortalized bone marrow-derived macrophage infection by <i>T. gondii</i> assessed by quantitative PCR.

    A. Mouse transcriptome non-negative matrix factorization component weights across all time points and conditions. Larger weight values indicate components with upregulated genes do... nork Dominykas Murza (22676289)

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    A. <i>T. gondii</i> gene group changes throughout the time course, expressed as log<sub>2</sub>(fold change) relative to pre-infection tachyzoites (t = 0). Grey area depicts the 95% confidence interval. n value refers to number of genes detected in each group. B. Gene set enrichment plot for most enriched terms from <i>T. gondii</i> transcriptome features at 15 min to 120 min. Five most significant terms are displayed for each database. C and D. Transcriptional profiles of top five upregulated and downregulated <i>T. gondii</i> transcription factors, respectively.

    A. <i>T. gondii</i> gene group changes throughout the time course, expressed as log<sub>2</sub>(fold change) relative to pre-infection tachyzoites (t = 0). Grey area depicts the 95... nork Dominykas Murza (22676289)

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    Oligonucleotides used in this study.

    Oligonucleotides used in this study. nork Dominykas Murza (22676289)

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    A. Library preparation strategy: poly-A(+) RNAs are captured by complementarity to reverse transcription primer, then second strand is synthesized using random hexamers and handles for sequencing are attached through two rounds of PCR. B. Mapped read distribution by species and by biotype. C and D. Principal component analysis of mouse and <i>T. gondii</i> transcriptomes, respectively. E and F. Volcano plots of Live <i>Toxoplasma</i>-infected mouse and <i>T. gondii</i> time points, respectively. To calculate Log<sub>2</sub>(Fold change), every timepoint is compared to corresponding samples (either macrophage or <i>Toxoplasma</i>) before infection (t = 0 min). Most significant and most upregulated transcripts are labelled. Number of significantly (p ≤ 0.05) downregulated and upregulated genes for each time point is given in blue and red, respectively. In F, 24-hour time point, red dots mark ROP

    A. Library preparation strategy: poly-A(+) RNAs are captured by complementarity to reverse transcription primer, then second strand is synthesized using random hexamers and handles... nork Dominykas Murza (22676289)

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    A. Experimental scheme of infection time course and downstream workflow; B. Optimization of tachyzoite concentration to achieve adequate infection rates, with a threshold set at 50% infection efficiency. Error bars represent ± 1 standard deviation. Corresponding MOI values are given for each condition; C. Infection time course micrograph merged from brightfield and green channels. <i>T. gondii</i> exhibits green fluorescence due to stable GFP expression in the strain used. Percentage at the top left indicates infection efficiency (± 1 standard deviation) for each time point.

    A. Experimental scheme of infection time course and downstream workflow; B. Optimization of tachyzoite concentration to achieve adequate infection rates, with a threshold set at 50... nork Dominykas Murza (22676289)

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  9. 29
    Summary of all significant gene enrichment terms for every condition (as combination of sample type and timepoint).

    Summary of all significant gene enrichment terms for every condition (as combination of sample type and timepoint). nork Dominykas Murza (22676289)

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  10. 30
    Quality control assessment of serum metabolomics data.

    Quality control assessment of serum metabolomics data. nork Ji-Xin Zhao (22056386)

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  11. 31
    Untargeted serum metabolomics analysis before and after <i>T. gondii</i> infection.

    Untargeted serum metabolomics analysis before and after <i>T. gondii</i> infection. nork Ji-Xin Zhao (22056386)

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  12. 32
    Effects of <i>T. gondii</i> infection on rat gut microbiota diversity.

    Effects of <i>T. gondii</i> infection on rat gut microbiota diversity. nork Ji-Xin Zhao (22056386)

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  13. 33
    Functional analysis of the intestinal microbial community following <i>T. gondii</i> infection.

    Functional analysis of the intestinal microbial community following <i>T. gondii</i> infection. nork Ji-Xin Zhao (22056386)

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  14. 34
    Spearman correlation analysis between gut microbial taxa and circulating metabolites, detailing correlation coefficients, significance values, and taxon–metabolite pairings indicative of microbiome–host metabolic interactions.

    Spearman correlation analysis between gut microbial taxa and circulating metabolites, detailing correlation coefficients, significance values, and taxon–metabolite pairings indicat... nork Ji-Xin Zhao (22056386)

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  15. 35
    KEGG pathway enrichment analysis of differential serum metabolites.

    KEGG pathway enrichment analysis of differential serum metabolites. nork Ji-Xin Zhao (22056386)

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  16. 36
    Heatmap of enriched KEGG pathways across samples, illustrating variations in pathway abundance.

    Heatmap of enriched KEGG pathways across samples, illustrating variations in pathway abundance. nork Ji-Xin Zhao (22056386)

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    Correlation network between intestinal bacterial species and differential serum metabolites.

    Correlation network between intestinal bacterial species and differential serum metabolites. nork Ji-Xin Zhao (22056386)

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  18. 38
    Pathway enrichment analysis of differential metabolites, highlighting significantly impacted metabolic pathways and associated enrichment statistics based on KEGG or other pathway databases.

    Pathway enrichment analysis of differential metabolites, highlighting significantly impacted metabolic pathways and associated enrichment statistics based on KEGG or other pathway... nork Ji-Xin Zhao (22056386)

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    Differential metabolite results, listing metabolites with significant changes across treatment groups, including fold changes, and <i>p</i>-values.

    Differential metabolite results, listing metabolites with significant changes across treatment groups, including fold changes, and <i>p</i>-values. nork Ji-Xin Zhao (22056386)

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  20. 40
    Graphical abstract.

    Graphical abstract. nork Ji-Xin Zhao (22056386)

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