Comparing steady states in BM3. by Bastiaan J. R. Cockx (18078759)

“…<p>Steady state organic carbon (Chemical Oxygen Demand, COD) and ammonium concentrations in the bulk liquid for the three different BM3 cases (HA: High ammonium, SC: Standard case, LA: Low ammonium) across 7 model implementations (W: a one-dimensional continuum biomass model run on the AQUASIM software [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1011303#pcbi.1011303.ref053" target="_blank">53</a>] and developed by Peter Reichert and Oskar Wanner [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1011303#pcbi.1011303.ref054" target="_blank">54</a>,<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1011303#pcbi.1011303.ref055" target="_blank">55</a>], M1: a variant of the W model with a fixed boundary-layer thickness by Eberhard Morgenroth <i>et al</i>. …”

Image_2_Targeted Alpha Therapy in mCRPC (Metastatic Castration-Resistant Prostate Cancer) Patients: Predictive Dosimetry and Toxicity Modeling of 225Ac-PSMA (Prostate-Specific Memb... by Maria Luisa Belli (7109243)

“…The results show that the radiobiological model implemented is conservative, as it overestimates the complication rate with respect to the clinical data. …”

Image_4_Targeted Alpha Therapy in mCRPC (Metastatic Castration-Resistant Prostate Cancer) Patients: Predictive Dosimetry and Toxicity Modeling of 225Ac-PSMA (Prostate-Specific Memb... by Maria Luisa Belli (7109243)

“…The results show that the radiobiological model implemented is conservative, as it overestimates the complication rate with respect to the clinical data. …”

Image_3_Targeted Alpha Therapy in mCRPC (Metastatic Castration-Resistant Prostate Cancer) Patients: Predictive Dosimetry and Toxicity Modeling of 225Ac-PSMA (Prostate-Specific Memb... by Maria Luisa Belli (7109243)

“…The results show that the radiobiological model implemented is conservative, as it overestimates the complication rate with respect to the clinical data. …”

Internal carbon flux distribution in <i>E</i>. <i>coli</i> BL21(DE3) and K-12 MG1655 strains. by Ji-Min Woo (3183483)

“…Carbon flux distribution was estimated based on stoichiometric constraints using a metabolic network model implemented in MetaFluxNet [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0163265#pone.0163265.ref030" target="_blank">30</a>]. …”

Validation analyses with multiple cohorts of datasets and characterization of genes located in regions with predicted CNV events. by Deng Wu (805710)

“…The heatmap on the top is an outcome of the Bayesian latent mixture model implemented to identify the posterior probabilities of alteration status in each cell and whole CNA region. …”

Identification of cell cycle re-engaging postmitotic excitatory neurons in single-nucleus transcriptomic profiles. by Deng Wu (805710)

“…The middle heatmap is an outcome of the Bayesian latent-mixture model implemented to identify the posterior probabilities of alteration status in each cell and whole CNA region. …”

Image_1_Targeted Alpha Therapy in mCRPC (Metastatic Castration-Resistant Prostate Cancer) Patients: Predictive Dosimetry and Toxicity Modeling of 225Ac-PSMA (Prostate-Specific Memb... by Maria Luisa Belli (7109243)

“…The results show that the radiobiological model implemented is conservative, as it overestimates the complication rate with respect to the clinical data. …”

Environmental DNA metabarcoding to monitor tropical reef fishes in Santa Marta by camille albouy (3800893)

“…<br></div><div><br></div><div><br><p><b>Filtering and taxonomic assignments </b><br></p><p><b>Obitools clustering:</b> Following the sequencing, reads were processed to remove errors and analyzed using programs implemented in the OBITools package (http://metabarcoding.org/obitools; Boyer et al., 2016) following a previous protocol (Valentini et al., 2016). …”

Rate-coding solution in detail. by Matthijs Pals (8952902)

“…Due to the rank constraint, in the absence of any input, the trained model implements a one-dimensional dynamical system (with variable <i>κ</i>). …”

Electoral Preferences and Regional Economies in Romania’s 2024 Presidential Elections: Local-Level Results, Sectoral Indicators, and Spatial Models by Norbert Petrovici (16322751)

“…<p dir="ltr"><b>Abstract: </b>This repository contains the full dataset and model implementation for the analysis of voting patterns in Romania's 2024 presidential elections, focusing on the relationship between territorial economic structures and electoral preferences. …”

Long-Term Cryptococcal Meningitis Survival, Uganda (DATA) by Mark Okwir (18169069)

“…. / Lira University, Faculty of Medicine, Lira, Uganda]</p><p dir="ltr"><b>Data Description:</b></p><p dir="ltr">This dataset is derived from a de-identified patient registry of the Meningitis Treatment Program implemented at Lira Regional Referral Hospital (LRRH) in rural northern Uganda. …”

Measurements of tissue partial pressure of O₂ (pO₂) across cortical layers of awake mice using 2-photon phosphorescence lifetime microscopy (2PLM). by Philipp Mächler (8727261)

“…Error bars show standard error calculated using a mixed effects model implemented in R (<i>p</i> > 0.1 for the top 35% and <i>p</i> < 0.05 for the bottom 35%). …”

Morphology-based neighbour-net of seed plants: quick exploratory data analysis of the matrix of Rothwell & Stockey (2016) by Guido Grimm (4111732)

“…</i>, 2001 one-parameter ('Markov') model implemented in RAxML), maximum parsimony, and least-squares estimated via the neighbour-joining algorithm (10,000 pseudoreplicates generated with PAUP*); and posterior probabilities (using MrBayes 3.2 and Lewis' model; Coiro et al. used the same programme but a general-time reversible model with potentially 9 x 9 substitution categories). …”

Diagonal Markov chain. by Mina A. Khoei (3709270)

“…While being equivalent to the push-mode described above, such a direct computation allows to more easily combine information from areas with different delays. Such a model implements Nijhawan’s “diagonal model”, but now motion information is probabilistic and therefore, inferred motion may be modulated by the respective precisions of the sensory and internal representations. …”

Supplement 1. R and WinBUGS code to facilitate running of the covariate state-space model. by Sophie Bestley (2921304)

“…</li> </ol> <p>example.R  contains R code for the worked Southern elephant seal example showing model implementation.</p> <p>dat4bugsCOV.R is an R function which prepares and writes input data for WinBUGS model.…”

Distribution of various types of TBPs in phylogenetically distant yeast species. by Regina Sepsiova (2622679)

“…Atp6-8-9-Cob-Cox1-2-3) by the maximum likelihood algorithm and LG (Le-Gascuel) amino acids substitution model implemented in the PhyML program [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0154225#pone.0154225.ref053" target="_blank">53</a>]. …”

Supplementary Material from <strong>Onditi, K. O., Song, W., Li, X., Musila, S., Chen, Z., Li, Q., Mathenge, J., Kioko, E., & Jiang, X. (2023). Untangling key abiotic predictors of... by Kenneth Onditi (9996788)

“…These include scripts for; 1) Preparation of community, metadata, phylogeny, and traits datasets, 2) Deriving Diversity indices, 3) Regression model selection, and 4) Regression model implementations used for analyzing diversity-predictor associations.…”

AI is in Your Classroom Even if You Didn't Know It by Lorena A. Barba (97553)

“…</p><p><br></p><p dir="ltr">[slide 4]</p><p dir="ltr">Many times you will read definitions of machine learning that say something to the effect of “Field of study that gives computers the ability to learn without being explicitly programmed”—this is not entirely correct, because the computers are indeed explicitly programmed, implementing an algorithm that optimizes some function to fit the data, or finds parameters to a model, or otherwise solves a data-based problem.…”

2nd Session of Green Financing Workshop, August 21st, 2025. INSTIPER Yogyakarta by Maulana Agung Wibowo (21240710)

“…Government's Role in Environmental Fund Management (Ibu Nia, BPBLH - Environmental Fund Management Agency)</h3><p dir="ltr">BPBLH, a Public Service Agency (BLU) under the Ministry of Finance, plays a crucial role in managing environmental funds with significant flexibility: * <b>Operational Flexibility:</b> BPBLH can directly contract with fund owners and disburse funds to various entities, including communities, private sectors, universities, NGOs, and local governments, accelerating program implementation compared to traditional state budget (APBN) mechanisms. * <b>Thematic Focus:</b> BPBLH's funding focuses on five key areas: 1. …”