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algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
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algorithm cl » algorithm co (Expand Search), algorithm _ (Expand Search), algorithm b (Expand Search)
algorithm a » algorithm _ (Expand Search), algorithm b (Expand Search), algorithms _ (Expand Search)
a functions » a function (Expand Search), _ functions (Expand Search), i functions (Expand Search)
cl function » l function (Expand Search), cell function (Expand Search), cep function (Expand Search)
algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
python function » protein function (Expand Search)
algorithm cl » algorithm co (Expand Search), algorithm _ (Expand Search), algorithm b (Expand Search)
algorithm a » algorithm _ (Expand Search), algorithm b (Expand Search), algorithms _ (Expand Search)
a functions » a function (Expand Search), _ functions (Expand Search), i functions (Expand Search)
cl function » l function (Expand Search), cell function (Expand Search), cep function (Expand Search)
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Comparison of deconvolution and optimization algorithms on a batch of data.
Published 2021“…Both experimental data have been resampled at 50ms and used to compute a set of TFs (in orange) either with direct deconvolution approaches (Fourier or Toeplitz methods, middle-upper panel TFs) or with 1-Γ function optimization performed by 3 different algorithms (middle-lower panel TFs). …”
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Contrast enhancement of digital images using dragonfly algorithm
Published 2024“…Comparisons with state-of-art methods ensure the superiority of the proposed algorithm. The Python implementation of the proposed approach is available in this <a href="https://github.com/somnath796/DA_contrast_enhancement" target="_blank">Github repository</a>.…”
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BOFdat: Generating biomass objective functions for genome-scale metabolic models from experimental data
Published 2019“…Despite its importance, no standardized computational platform is currently available to generate species-specific biomass objective functions in a data-driven, unbiased fashion. To fill this gap in the metabolic modeling software ecosystem, we implemented BOFdat, a Python package for the definition of a <b>B</b>iomass <b>O</b>bjective <b>F</b>unction from experimental <b>dat</b>a. …”
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Search Algorithms and Loss Functions for Bayesian Clustering
Published 2022“…<p>We propose a randomized greedy search algorithm to find a point estimate for a random partition based on a loss function and posterior Monte Carlo samples. …”
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Comparison of scores obtained by our interpenetration and scoring algorithm (ISA) and ROSETTA for a subset of structures.
Published 2023“…However, our algorithm was 1000 times faster than pyROSETTA (both algorithms have been parallelized on a per-structure basis using the Python package joblib [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1010531#pcbi.1010531.ref069" target="_blank">69</a>]).…”
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