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algorithm allows » algorithm flow (Expand Search)
allows functions » loss functions (Expand Search), also functions (Expand Search), various functions (Expand Search)
algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
python function » protein function (Expand Search)
algorithm b » algorithm _ (Expand Search), algorithms _ (Expand Search)
b function » _ function (Expand Search), a function (Expand Search), 1 function (Expand Search)
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Using synthetic data to test group-searching algorithms in a context where the correct grouping of species is known and uniquely defined.
Published 2024“…The model also includes <i>H</i> other resources for species to compete over, which create additional variability (omitted for clarity, see text). (B) The synthetic dataset is generated by repeatedly selecting a random subset of 15 species and allowing the community to equilibrate (see Eqs <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012590#pcbi.1012590.e001" target="_blank">1a</a>–<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012590#pcbi.1012590.e004" target="_blank">1d</a>). …”
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Design example using the structure of the LecB lectin <i>Pseudomonas aeruginosa</i> strain PA14 (PDB ID: 5A6Y [67]) and the osprey workflow for fries/<i>EWAK</i>*.
Published 2020“…<i>EWAK</i>* limits the conformations included in each partition function as described in the Section entitled “Energy Window Approximation to K* (<i>EWAK</i>*).” …”
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