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algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
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algorithm cep » algorithm cl (Expand Search), algorithm co (Expand Search), algorithm seu (Expand Search)
cep function » cell function (Expand Search), step function (Expand Search), t4p function (Expand Search)
algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
using functions » using functional (Expand Search), lung functions (Expand Search), side functions (Expand Search)
python function » protein function (Expand Search)
algorithm cep » algorithm cl (Expand Search), algorithm co (Expand Search), algorithm seu (Expand Search)
cep function » cell function (Expand Search), step function (Expand Search), t4p function (Expand Search)
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BOFdat: Generating biomass objective functions for genome-scale metabolic models from experimental data
Published 2019“…Despite its importance, no standardized computational platform is currently available to generate species-specific biomass objective functions in a data-driven, unbiased fashion. To fill this gap in the metabolic modeling software ecosystem, we implemented BOFdat, a Python package for the definition of a <b>B</b>iomass <b>O</b>bjective <b>F</b>unction from experimental <b>dat</b>a. …”
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Search Algorithms and Loss Functions for Bayesian Clustering
Published 2022“…<p>We propose a randomized greedy search algorithm to find a point estimate for a random partition based on a loss function and posterior Monte Carlo samples. …”
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The eVIP algorithm uses RNA-seq data to predict the function of somatic mutations.
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