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Comparison with the BST algorithm for the AF and CST bundles.
Published 2025Subjects: “…Cell Biology…”
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Immune microenvironment (A) Comparison of immune cell infiltration between the high-risk and low-risk groups using the ssGSEA algorithm.
Published 2025“…<p>(B) Comparison of immune function between the high-risk and low-risk groups using the ssGSEA algorithm. …”
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Core genes were selected through PPI analysis based on three algorithms.
Published 2024“…<p>Among 46 DEGs whose expression significantly changed in A549 and BEAS-2B cell lines, the core genes were selected using three algorithms: MCC, MNC, and DEGREE. …”
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Modular architecture design of PyNoetic showing all its constituent functions.
Published 2025Subjects: -
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Dice score for various <i>α</i> values (from the Eq 8) for the tracking of the CST and for the iFOD and PTT algorithms.
Published 2025Subjects: “…Cell Biology…”
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Python-Based Algorithm for Estimating NRTL Model Parameters with UNIFAC Model Simulation Results
Published 2025“…This algorithm conducts a series of procedures: (1) fragmentation of the molecules into functional groups from SMILES, (2) calculation of activity coefficients under predetermined temperature and mole fraction conditions by employing universal quasi-chemical functional group activity coefficient (UNIFAC) model, and (3) regression of NRTL model parameters by employing UNIFAC model simulation results in the differential evolution algorithm (DEA) and Nelder–Mead method (NMM). …”
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<b>Opti2Phase</b>: Python scripts for two-stage focal reducer
Published 2025“…</li></ul><p dir="ltr">The scripts rely on the following Python packages. Where available, repository links are provided:</p><ol><li><b>NumPy</b>, version 1.22.1</li><li><b>SciPy</b>, version 1.7.3</li><li><b>PyGAD</b>, version 3.0.1 — https://pygad.readthedocs.io/en/latest/#</li><li><b>bees-algorithm</b>, version 1.0.2 — https://pypi.org/project/bees-algorithm</li><li><b>KrakenOS</b>, version 1.0.0.19 — https://github.com/Garchupiter/Kraken-Optical-Simulator</li><li><b>matplotlib</b>, version 3.5.2</li></ol><p dir="ltr">All scripts are modular and organized to reflect the design stages described in the manuscript.…”
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EFGs: A Complete and Accurate Implementation of Ertl’s Functional Group Detection Algorithm in RDKit
Published 2025“…In this paper, a new RDKit/Python implementation of the algorithm is described, that is both accurate and complete. …”
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FAR-1: A Fast Integer Reduction Algorithm Compared to Collatz and Half-Collatz
Published 2025Subjects: -
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A framework for improving localisation prediction algorithms.
Published 2024“…One can expect that the combination of multi-dimensional parameters from evolutionary biology, cell biology and molecular biology on evolutionary diverse species will significantly improve the next generation of machine leaning algorithms that serve localisation (and function) predictions.…”
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