Our algorithms process large data sets within a minute. حسب Manu Aggarwal (15990691)

Fold Change (FC) in protein levels among non-survivors compared to survivors in 40 CERES participants. حسب Yue Ren (1311615)

الموضوعات:

Flexible CDOCKER: Hybrid Searching Algorithm and Scoring Function with Side Chain Conformational Entropy حسب Yujin Wu (2901128)

"…Here, we propose a new physics-based scoring function that includes both enthalpic and entropic contributions upon binding by considering the conformational variability of the flexible side chains within the ensemble of docked poses. …"

Flexible CDOCKER: Hybrid Searching Algorithm and Scoring Function with Side Chain Conformational Entropy حسب Yujin Wu (2901128)

"…Here, we propose a new physics-based scoring function that includes both enthalpic and entropic contributions upon binding by considering the conformational variability of the flexible side chains within the ensemble of docked poses. …"

Significantly dysregulated proteins (|log2FC | ≤  0.5, adj. p-value ≤  0.05) in SCA1 (805 proteins). حسب Aimilia-Christina Vagiona (17584758)

الموضوعات:

Genetic algorithms can be applied to higher-dimensional design problems. حسب Lu Hong (399882)

الموضوعات:

Algorithmic assessment reveals functional implications of GABRD gene variants linked to idiopathic generalized epilepsy حسب Ayla Arslan (17943365)

"…Initially, separate algorithms based on sequence homology are utilized to assess this variant set. …"

NRPStransformer, an Accurate Adenylation Domain Specificity Prediction Algorithm for Genome Mining of Nonribosomal Peptides حسب Zhihan Zhang (1403308)

"…Leveraging the sequences within the flavodoxin-like subdomain, we developed a substrate specificity prediction algorithm using a protein language model, achieving 92% overall prediction accuracy for 43 frequently observed amino acids, significantly improving the prediction reliability. …"

DataSheet1_The evolution of flexibility and function in the Fc domains of IgM, IgY, and IgE.pdf حسب Rosaleen A. Calvert (10039787)

"…This permits additional flexibility within the Fc region, which has been exploited by nature to modulate antibody effector functions. …"

Super.Complex identifies likely protein complexes within a PPI network using a distributed supervised AutoML method. حسب Meghana Venkata Palukuri (11890672)

الموضوعات:

Internal symmetry in crystallin proteins. حسب Spencer E. Bliven (6672755)

الموضوعات:

Identification of hub genes from the PPI network by bottleneck algorithm using the cytoHubba Cytoscape plugin. حسب Cihat Erdogan (12529243)

Comparison between different PSO algorithms on function 4–6. حسب Lai Xu (1828831)

Comparison between different PSO algorithms on function 1–3. حسب Lai Xu (1828831)

Comparison between different PSO algorithms on function 7–8. حسب Lai Xu (1828831)

Similarity between the allegiance matrices of the multiplex SC-FC graph, the FC graph alone, and the SC graph alone, as a function of the topological scale for the group. حسب Arian Ashourvan (6685232)

S2 File - حسب Yue Ren (1311615)

الموضوعات:

Core genes were selected through PPI analysis based on three algorithms. حسب Dong-Hee Han (140305)

"…<p>Among 46 DEGs whose expression significantly changed in A549 and BEAS-2B cell lines, the core genes were selected using three algorithms: MCC, MNC, and DEGREE. <b>(A)</b> The top 10 genes were prioritized using MCC analysis, which identifies the largest clique within the PPI network and selects the central proteins within the clique. …"

Force Field Optimization Guided by Small Molecule Crystal Lattice Data Enables Consistent Sub-Angstrom Protein–Ligand Docking حسب Hahnbeom Park (665004)

الموضوعات:

Automated correction of fluorescence bleedthrough in the larval eye. حسب Sebastian M. Bernasek (8525829)

الموضوعات: