Our algorithms process large data sets within a minute. by Manu Aggarwal (15990691)

Algorithmic assessment reveals functional implications of GABRD gene variants linked to idiopathic generalized epilepsy by Ayla Arslan (17943365)

“…</p> <p>The study employs a combination of in silico algorithms to analyze 82 variants of unknown clinical significance of GABRD gene sourced from the ClinVar database. …”

Function graph and algorithm iterative graph. by WanRu Zhao (18980374)

Subjects:

Frequency of frameshift mutations in tumor suppressor genes within TCGA and DFCI cohorts. by Alexis M. Thornton (11068403)

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Identification and functional analysis of hub genes. by Wei Ya Lan (22403712)

“…(B) PPI network visualized using Cytoscape software. (C, D) Top 10 hub genes identified using the Maximal Clique Centrality (MCC) algorithm; darker colors indicate higher centrality within the PPI network. …”

Results of proposed algorithms and algorithms in [9] for 18 instances. by Jin Zhang (53297)

Test functions. by Kejia Liu (5699651)

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Core genes were selected through PPI analysis based on three algorithms. by Dong-Hee Han (140305)

“…<b>(B)</b> The priority of the top 10 genes was evaluated through MNC, which identifies clusters of protein nodes that are more functionally connected to each other and selects the central proteins within the cluster. …”

Highly interrelated genes and their biological functions among 21 cancers. by Qunlun Shen (11668968)

Identification of hub genes from the PPI network by bottleneck algorithm using the cytoHubba Cytoscape plugin. by Cihat Erdogan (12529243)

Multimodal reference functions. by Ruiyu Zhan (21602031)

“…We performed comparative analyses against other methodologies across various functions and public datasets to assess their effectiveness. …”

Activation functions: Sigmoid function and ReLU function. by Wan-Hua Zhang (21601139)

Efficient algorithms to discover alterations with complementary functional association in cancer by Rebecca Sarto Basso (6728921)

“…Among such patterns, <i>mutual exclusivity</i> has been employed by several recent methods that have shown its effectiveness in characterizing gene sets associated to cancer. Mutual exclusivity arises because of the complementarity, at the functional level, of alterations in genes which are part of a group (e.g., a <i>pathway</i>) performing a given function. …”

Illustration of methods based on Green’s function first-passage algorithms. by Jean Marc Tregan (15195173)

“…<p>Illustration of methods based on Green’s function first-passage algorithms.</p>…”

APSO–CNN and FNN algorithms’ loss function training sets. by Ahmed Bahaa (12887063)

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APSO–CNN and FNN algorithms’ loss function validation sets. by Ahmed Bahaa (12887063)

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Optimization results of test functions for different algorithm improvement points. by WanRu Zhao (18980374)

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Comparison of results of different algorithms. by Zhongzhong Guo (12133402)

Subjects: “…differentially expressed genes…”

The convergence curves of the test functions. by Ruiyu Zhan (21602031)

“…We performed comparative analyses against other methodologies across various functions and public datasets to assess their effectiveness. …”

Single-peaked reference functions. by Ruiyu Zhan (21602031)

“…We performed comparative analyses against other methodologies across various functions and public datasets to assess their effectiveness. …”