The most significant functions in seven gene sets. حسب Pengcheng Zhao (6009899)

BOFdat: Generating biomass objective functions for genome-scale metabolic models from experimental data حسب Jean-Christophe Lachance (6619307)

"…Despite its importance, no standardized computational platform is currently available to generate species-specific biomass objective functions in a data-driven, unbiased fashion. To fill this gap in the metabolic modeling software ecosystem, we implemented BOFdat, a Python package for the definition of a <b>B</b>iomass <b>O</b>bjective <b>F</b>unction from experimental <b>dat</b>a. …"

Prediction performance of different optimization algorithms. حسب Ali-Kemal Aydin (10968731)

The optimal solution set of NYN by using different algorithms. حسب Yi Tao (178829)

الموضوعات: "…evolutionary genetic algorithm…"

The optimal solution set of HN by using different algorithms. حسب Yi Tao (178829)

الموضوعات: "…evolutionary genetic algorithm…"

FAR-1: A Fast Integer Reduction Algorithm Compared to Collatz and Half-Collatz حسب Faizan Ali (21689861)

الموضوعات:

Glioblastoma multiforme (GBM) pathway modules identified by the netboxr package from cancer genomics alteration data without the use of pre-defined gene sets. حسب Eric Minwei Liu (9592176)

"…For more detailed understanding users should also inspect the function of the genes contained in the modules. In this glioblastoma example, the largest module (M1, light orange background) contains genes related to the PIK3 pathway and functions related to AKT signaling (also known as “PKB signaling” in the GO Gene Ontology). …"

Python scripts used to model CPU errors by Poisson distribution density mass function and to draw graph of Poisson events (needs Matplot, SciPy, PysimpleGUI and NumPy) حسب Santhosh Kumar Rajamani (13023678)

Algorithm framework. حسب Zongjin Li (38031)

الموضوعات:

Efficient algorithms to discover alterations with complementary functional association in cancer حسب Rebecca Sarto Basso (6728921)

"…Among such patterns, <i>mutual exclusivity</i> has been employed by several recent methods that have shown its effectiveness in characterizing gene sets associated to cancer. Mutual exclusivity arises because of the complementarity, at the functional level, of alterations in genes which are part of a group (e.g., a <i>pathway</i>) performing a given function. …"

Comparison of deconvolution and optimization algorithms on a batch of data. حسب Ali-Kemal Aydin (10968731)

Verification of the in-line PS function. حسب Raul Castañeda (13932971)

Available functions in the utility package. حسب Raul Castañeda (13932971)

MSVM-RFE algorithm for screening key genes. حسب Ya xi Zhu (11624730)

Performance of ENQUIRE’s gene normalization algorithm. حسب Luca Musella (19986312)

Principle and construction of a Riboverlap. حسب Antoine L. Decrulle (11540003)

الموضوعات:

Gene-gene cosine similarities within TRANSPATH® pathways of given number of genes. حسب Halima Alachram (11570633)

الموضوعات:

Gene-gene cosine similarities within Reactome pathways of given number of genes. حسب Halima Alachram (11570633)

الموضوعات:

Probably pathogenic variants (algorithms). حسب Felipe Fidalgo (642532)

Available functions in the phase-shifting package. حسب Raul Castañeda (13932971)