Functional effect prediction of FUS mutations by ten nsSNP prediction algorithms. by L. F. S. Bonet (11502082)

Comparison between algorithm and expert cell counting. by Adam L. Tyson (10892822)

Subjects:

Algorithmic assessment reveals functional implications of GABRD gene variants linked to idiopathic generalized epilepsy by Ayla Arslan (17943365)

“…</p> <p>The study identifies specific variants (L111R, R114C, D123N, G150S, and L243P) in the coding region of the GABRD gene, which are predicted as deleterious by multiple algorithms. …”

Functional annotation enrichment of gene lists upregulated during molting. by Alexandra Grote (3878305)

Sub-model-specific gene sets with functional annotations and weights. by Josh L. Espinoza (10492448)

Visualization of the RITSS algorithm. by Julian Hecker (758791)

Algorithm performance compared to mean of expert manual counts with varying axial sampling. by Adam L. Tyson (10892822)

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Integration of three machine learning algorithms to characterize lipid metabolism-associated hub genes in sepsis and atrial fibrillation. by Changze Ou (22806374)

Functional validation of the metastasis-predictive genes inferred by PLUS from TCGA data. by Junyi Zhou (495644)

Overall eVIP2 outputs for <i>ARAF</i> variants using only L1000 genes. by Alexis M. Thornton (11068403)

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Radius of gyration (RG) of the backbone atoms of the protein as a function of time. by L. F. S. Bonet (11502082)

Solvent-accessible surface area (SASA) of the protein as a function of time. by L. F. S. Bonet (11502082)

Listed python codes of our algorithm with explanations (Python 3.9 recommended). by Takayuki Niizato (162226)

Multimodal reference functions. by Ruiyu Zhan (21602031)

“…We performed comparative analyses against other methodologies across various functions and public datasets to assess their effectiveness. …”

Root mean square deviation (RMSD) of the backbone atoms of the protein as a function of time. by L. F. S. Bonet (11502082)

Functional annotation and PPI analysis of turquoise module genes. by Minhui Xi (20114243)

The convergence curves of the test functions. by Ruiyu Zhan (21602031)

“…We performed comparative analyses against other methodologies across various functions and public datasets to assess their effectiveness. …”

Single-peaked reference functions. by Ruiyu Zhan (21602031)

“…We performed comparative analyses against other methodologies across various functions and public datasets to assess their effectiveness. …”

Algorithm timings on a laptop computer with Intel i9–9900K CPU, 32GB RAM and an NVIDIA RTX2080 GPU. by Adam L. Tyson (10892822)

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Application of the algorithm to unseen data. Presynaptic neurons labelled by rabies viral injection into layer 2/3 primary visual cortex in Penk-Cre mice. by Adam L. Tyson (10892822)

Subjects: