Pathway analysis bubble plot for module 1. by Zongjin Li (38031)

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The most significant GO terms and p-values for each of the five modules. by Zongjin Li (38031)

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The ROC Curve of Comparison with published methods. by Zongjin Li (38031)

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GO analysis bubble plot for other four modules. by Zongjin Li (38031)

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Code snippets to add user-specific custom functionality in PyNoetic. by Gursimran Singh (575288)

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Computational time for each algorithm as functions of (1) number of genes, with a fixed number of 1200 cells per time point (left); or (2) number of cells per time point, with a fixed number of 100 genes. by Wenjun Zhao (644283)

“…<p>Computational time for each algorithm as functions of (1) number of genes, with a fixed number of 1200 cells per time point (left); or (2) number of cells per time point, with a fixed number of 100 genes.…”

Spatial domain analysis of the mouse olfactory bulb using STOmics Stereo-seq data. by Ian K. Gingerich (22822222)

Python implementation from Symplectic decomposition from submatrix determinants by Jason L. Pereira (11598632)

“…Python implementation of the algorithm and demonstration of how to use the functions.…”

Frequency of frameshift mutations in tumor suppressor genes within TCGA and DFCI cohorts. by Alexis M. Thornton (11068403)

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RASP performance across different scales in the Mouse Sagittal brain dataset. by Ian K. Gingerich (22822222)

Table_1_Integrated Bioinformatics Algorithms and Experimental Validation to Explore Robust Biomarkers and Landscape of Immune Cell Infiltration in Dilated Cardiomyopathy.XLS by Qingquan Zhang (1405300)

“…In addition, the differentially expressed genes (DEGs) were screened by the limma package, and DEGs were analyzed for functional enrichment. …”

Image_1_Integrated Bioinformatics Algorithms and Experimental Validation to Explore Robust Biomarkers and Landscape of Immune Cell Infiltration in Dilated Cardiomyopathy.TIFF by Qingquan Zhang (1405300)

“…In addition, the differentially expressed genes (DEGs) were screened by the limma package, and DEGs were analyzed for functional enrichment. …”

Validation of hub genes and diagnostic models. by Guanghao Xin (17583227)

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Studies on <i>Agrobacterium</i>-mediated gene transformation of chrysanthemums using <i>GUS</i> gene. by Mohsen Hesami (6917390)

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Source code for splice variant algorithm from A Novel Functional Splice Variant of <i>AKT3</i> Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Ca... by Theresa Guo (687267)

Multi-scale t kernel function under different parameters. by Wen Bo Liu (11559222)

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Biological functions and network analysis of highly interrelated genes selected by ADC across modalities. by Qunlun Shen (11668968)

GraSPy: an Open Source Python Package for Statistical Connectomics by Benjamin Pedigo (6580352)

“…We developed GraSPy, an open-source Python toolkit for statistical inference on graphs. …”

Gene Ontology terms of the 6 hub genes. by Ravinder Sharma (13154079)

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Spatial domain analysis of human breast cancer tissue using 10x Xenium data. by Ian K. Gingerich (22822222)