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Prediction performance of different optimization algorithms.
Published 2021“…<p>(A) 3 algorithms were compared in terms of the residuals of the cost function of the optimized TF on 7 mice datasets (Derivative free algorithm failed in optimizing a TF in a mouse). …”
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Comparison of deconvolution and optimization algorithms on a batch of data.
Published 2021“…Output is given by the vascular response, measured as the change in speed of red blood cells flowing inside a capillary proximal to the recorded neuronal activation (in yellow, right panel). Both experimental data have been resampled at 50ms and used to compute a set of TFs (in orange) either with direct deconvolution approaches (Fourier or Toeplitz methods, middle-upper panel TFs) or with 1-Γ function optimization performed by 3 different algorithms (middle-lower panel TFs). …”
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Feature selection algorithm.
Published 2023“…Our analysis pipeline included pre-processing steps, feature extraction from both time and frequency domains, a voting algorithm for selecting features, and model training and validation. …”
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Summary of results of naïve Bayes algorithms.
Published 2024“…Algorithms trained without auditory variables as features were statistically worse (p < .001) in both the primary measure of area under the curve (0.82/0.78) and the secondary measure of accuracy (72.3%/74.5%) for the Gaussian and kernel algorithms respectively.…”
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As for Fig 2, we present failure rates as a function of the cohort size (vertical axis) versus the number of distractors (horizontal axis), for the Smyth and McClave baseline algor...
Published 2020“…<p>We explore the behaviour of the baseline algorithm both in terms of whether it can recover maximally diverse cohorts (upper four panels), and whether it can recover imbalanced cohorts. …”
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Bioinformatic Analysis Reveals both Oversampled and Underexplored Biosynthetic Diversity in Nonribosomal Peptides
Published 2023“…We also discuss possible ways bioinformaticians and biochemists could work together to improve the existing prediction algorithms.…”
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