Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm by Spencer E. Bliven (6672755)

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Automated unsupervised annotation of clones in the larval eye. by Sebastian M. Bernasek (8525829)

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Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics by Paolo Cifani (1575613)

“…Termed SAMPEI for spectral alignment-based modified peptide identification, this open-source algorithm is designed for the discovery of functional protein and peptide signaling modifications, without prior knowledge of their identities. …”

Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics by Paolo Cifani (1575613)

“…Termed SAMPEI for spectral alignment-based modified peptide identification, this open-source algorithm is designed for the discovery of functional protein and peptide signaling modifications, without prior knowledge of their identities. …”

Automated correction of fluorescence bleedthrough in the larval eye. by Sebastian M. Bernasek (8525829)

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Perturbing gene expression via mitotic recombination. by Sebastian M. Bernasek (8525829)

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Sub-model-specific gene sets with functional annotations and weights. by Josh L. Espinoza (10492448)

Rare variants in <i>SMYD1</i> and <i>BMP10</i> identified in family 346 are functionally damaging. by David M. Gordon (3259002)

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Morpheus: A fragment-based algorithm to predict metamorphic behaviour in proteins across proteomes by Vijay Subramanian (20718933)

“…<p dir="ltr">Supplementary material for Morpheus: A fragment-based algorithm to predict metamorphic behaviour in proteins across proteomes.…”

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta by Morgan L. Nance (10981871)

“…In this work, we introduce <i>GlycanDock</i>, a residue-centric protein–glycoligand docking refinement algorithm developed within the Rosetta macromolecular modeling and design software suite. …”

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta by Morgan L. Nance (10981871)

“…In this work, we introduce <i>GlycanDock</i>, a residue-centric protein–glycoligand docking refinement algorithm developed within the Rosetta macromolecular modeling and design software suite. …”

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta by Morgan L. Nance (10981871)

“…In this work, we introduce <i>GlycanDock</i>, a residue-centric protein–glycoligand docking refinement algorithm developed within the Rosetta macromolecular modeling and design software suite. …”

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta by Morgan L. Nance (10981871)

“…In this work, we introduce <i>GlycanDock</i>, a residue-centric protein–glycoligand docking refinement algorithm developed within the Rosetta macromolecular modeling and design software suite. …”

Development and Evaluation of GlycanDock: A Protein–Glycoligand Docking Refinement Algorithm in Rosetta by Morgan L. Nance (10981871)

“…In this work, we introduce <i>GlycanDock</i>, a residue-centric protein–glycoligand docking refinement algorithm developed within the Rosetta macromolecular modeling and design software suite. …”

Connectivity of dysregulated proteins in SCA1 cells. by Aimilia-Christina Vagiona (17584758)

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Critical proteins associated with SCA1 pathology. by Aimilia-Christina Vagiona (17584758)

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Table_1_Overlapping Structures Detection in Protein-Protein Interaction Networks Using Community Detection Algorithm Based on Neighbor Clustering Coefficient.docx by Yan Wang (15435)

“…<p>With the rapid development of bioinformatics, researchers have applied community detection algorithms to detect functional modules in protein-protein interaction (PPI) networks that can predict the function of unknown proteins at the molecular level and further reveal the regularity of cell activity. …”

Table_1_Overlapping Structures Detection in Protein-Protein Interaction Networks Using Community Detection Algorithm Based on Neighbor Clustering Coefficient.docx by Yan Wang (15435)

“…<p>With the rapid development of bioinformatics, researchers have applied community detection algorithms to detect functional modules in protein-protein interaction (PPI) networks that can predict the function of unknown proteins at the molecular level and further reveal the regularity of cell activity. …”

Computational predictions by osprey/fries/<i>EWAK</i>* that were selected for experimental validation. by Anna U. Lowegard (8051597)

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Practical rules for summing the series of the Tweedie probability density function with high-precision arithmetic by NELSON L. DIAS (8078003)

“…With these practical rules, simple summation algorithms provide sufficiently robust results for the calculation of the density function and its definite integrals. …”