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algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
where functions » wave functions (Expand Search), sphere function (Expand Search), phase functions (Expand Search)
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Python implementation of the Trajectory Adaptive Multilevel Sampling algorithm for rare events and improvements
Published 2021“…In `main.py`, the parameters for the TAMS algorithm are specified (trajectory time, time step, score function, number of particles, type of score threshold, maximum number of iterations, noise level etc.). …”
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FAR-1: A Fast Integer Reduction Algorithm Compared to Collatz and Half-Collatz
Published 2025Subjects: -
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<b>Opti2Phase</b>: Python scripts for two-stage focal reducer
Published 2025“…</li></ul><p dir="ltr">The scripts rely on the following Python packages. Where available, repository links are provided:</p><ol><li><b>NumPy</b>, version 1.22.1</li><li><b>SciPy</b>, version 1.7.3</li><li><b>PyGAD</b>, version 3.0.1 — https://pygad.readthedocs.io/en/latest/#</li><li><b>bees-algorithm</b>, version 1.0.2 — https://pypi.org/project/bees-algorithm</li><li><b>KrakenOS</b>, version 1.0.0.19 — https://github.com/Garchupiter/Kraken-Optical-Simulator</li><li><b>matplotlib</b>, version 3.5.2</li></ol><p dir="ltr">All scripts are modular and organized to reflect the design stages described in the manuscript.…”
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An expectation-maximization algorithm for finding noninvadable stationary states.
Published 2020“…<p><i>(a)</i> Noninvadable states by definition can only exist in the region Ω of resource space where the growth rate <i>dN</i><sub><i>i</i></sub>/<i>dt</i> of each species <i>i</i> is zero or negative. …”
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Background heterogeneity and sequencing depth improve WheresWalker SNPindex.
Published 2025Subjects: -
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WheresWalker pipeline utilizes WGS data to identify segregating SNPs and indels.
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Bulk Segregant Analysis (BSA) homozygosity mapping mirrors WheresWalker output.
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WheresWalker identifies the correct chromosomal region for three dark yolk loci.
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