ADT: A Generalized Algorithm and Program for Beyond Born–Oppenheimer Equations of “<i>N</i>” Dimensional Sub-Hilbert Space by Koushik Naskar (7510592)

“…In order to overcome such shortcoming, we develop a generalized algorithm, “ADT” to generate the nonadiabatic equations through symbolic manipulation and to construct highly accurate diabatic surfaces for molecular processes involving excited electronic states. …”

Shortest path (geodesic) between two trees in the BHV treespace. by Marzieh Khodaei (16436750)

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Results of the application of different clustering algorithms to average functional connectivity from healthy subjects. by Francisco Páscoa dos Santos (16510676)

“…<p>A) Resulting cluster inertia from applying the k-means algorithm described in the methods to empirical averaged functional connectivity from healthy subjects, with different numbers of clusters. …”

PathOlOgics_RBCs Python Scripts.zip by Ahmed Elsafty (16943883)

Exploring Molecular Energy Landscapes by Coupling the DFTB Potential with a Tree-Based Stochastic Algorithm: Investigation of the Conformational Diversity of Phthalates by Valentin Milia (18175915)

Model selection for machine learning algorithm based on microbial abundances. by Elio L. Herzog (11576876)

HRV variables, as a function of BIS^TM<60 and BIS^TM≥60 periods. by Anne Wojtanowski (17507992)

Hierarchical clustering trees comparing the L-Measure method, our combined Sholl descriptors, and our vector for all datasets. by Reem Khalil (10898163)

Contour and surface plots of Pathtrees for dataset <i>D</i>₁ when generating 15 pathtree per starting tree pair, using weighted Robinson-Foulds distances for the MDS inp... by Marzieh Khodaei (16436750)

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Contour and surface plots from Pathtrees for dataset <i>D</i>₂, using weighted Robinson-Foulds distances for the MDS input, and thin-plate spline interpolation for the l... by Marzieh Khodaei (16436750)

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An example of sample treespace and its convex hull. by Marzieh Khodaei (16436750)

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Comparison of the best tree found by Pathtrees, Paup*, and RAxML using the data <i>D</i>₂. by Marzieh Khodaei (16436750)

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Contour and surface plots of Pathtrees for dataset <i>D</i>₁ when generating one pathtree per starting tree pair (91 pathtrees), using BHV distances for the MDS input, a... by Marzieh Khodaei (16436750)

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The parameters for our DC-based gradient boosting tree (GBT) models. by Xiang Liu (119470)

Code snippets to add user-specific custom functionality in PyNoetic. by Gursimran Singh (575288)

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Python implementation from Symplectic decomposition from submatrix determinants by Jason L. Pereira (11598632)

“…Python implementation of the algorithm and demonstration of how to use the functions.…”

Placentone fetal trees generated with different global branch distribution penalty weights while keeping other input parameters fixed. by Diana C. de Oliveira (9220729)

Mumps tree AutoPhy analysis. by Adrian N. Ortiz-Velez (17775800)

“…However, automation of functional clustering based on phylogenetic trees has been challenging and most of it is done manually. …”

Covid tree AutoPhy analysis. by Adrian N. Ortiz-Velez (17775800)

“…However, automation of functional clustering based on phylogenetic trees has been challenging and most of it is done manually. …”

GraSPy: an Open Source Python Package for Statistical Connectomics by Benjamin Pedigo (6580352)

“…We developed GraSPy, an open-source Python toolkit for statistical inference on graphs. …”