Python implementation of the Trajectory Adaptive Multilevel Sampling algorithm for rare events and improvements by Pascal Wang (10130612)

“…<div>This directory contains Python 3 scripts implementing the Trajectory Adaptive Multilevel Sampling algorithm (TAMS), a variant of Adaptive Multilevel Splitting (AMS), for the study of rare events. …”

Immune infiltration analysis by CIBERSORT algorithm. by Lanying Shen (22755930)

Immune infiltration analysis by CIBERSORT algorithm. by Lanying Shen (22755930)

Immune microenvironment (A) Comparison of immune cell infiltration between the high-risk and low-risk groups using the ssGSEA algorithm. by Chengting Wu (21485612)

“…<p>(B) Comparison of immune function between the high-risk and low-risk groups using the ssGSEA algorithm. …”

Model construction and validation (A) Construction of the model based on multiple machine learning algorithms. by Chengting Wu (21485612)

Differential analysis between the high- and low-risk score groups and functional analyses of DEGs. by Jian Wen (286688)

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Classification performance of four machine learning algorithms on the test set. by Maryam Ahmadzadeh (8590380)

Listed python codes of our algorithm with explanations (Python 3.9 recommended). by Takayuki Niizato (162226)

Python-based Monte Carlo Simulation Tool by Yangfan Jiang (9372782)

Overall accuracy of the neural network for the identification of high-risk COVID-19 patients, at the first clinical stage, as a function of (a) the number of neurons in the hidden... by Mario A. Quiroz-Juárez (11457140)

Five types of Beta functions considered. by Luan Carlos de Sena Monteiro Ozelim (16914117)

Python-Based Algorithm for Estimating NRTL Model Parameters with UNIFAC Model Simulation Results by Se-Hee Jo (20554623)

“…This algorithm conducts a series of procedures: (1) fragmentation of the molecules into functional groups from SMILES, (2) calculation of activity coefficients under predetermined temperature and mole fraction conditions by employing universal quasi-chemical functional group activity coefficient (UNIFAC) model, and (3) regression of NRTL model parameters by employing UNIFAC model simulation results in the differential evolution algorithm (DEA) and Nelder–Mead method (NMM). …”

<b>Opti2Phase</b>: Python scripts for two-stage focal reducer by Morgan Najera (21540776)

“…</li></ul><p dir="ltr">The scripts rely on the following Python packages. Where available, repository links are provided:</p><ol><li><b>NumPy</b>, version 1.22.1</li><li><b>SciPy</b>, version 1.7.3</li><li><b>PyGAD</b>, version 3.0.1 — https://pygad.readthedocs.io/en/latest/#</li><li><b>bees-algorithm</b>, version 1.0.2 — https://pypi.org/project/bees-algorithm</li><li><b>KrakenOS</b>, version 1.0.0.19 — https://github.com/Garchupiter/Kraken-Optical-Simulator</li><li><b>matplotlib</b>, version 3.5.2</li></ol><p dir="ltr">All scripts are modular and organized to reflect the design stages described in the manuscript.…”

Convergence curves of the two algorithms in the Griewank function. by Huazan Liu (9137461)

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Convergence curves of the two algorithms in the Rastrigin function. by Huazan Liu (9137461)

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Ant colony algorithm function and parameter explanation. by Yang Yu (4292)

Evaluation of the collision risk estimation algorithm. by Kei Mizuno (15239)

<b>Algorithm Pseudocode</b> by Yibin Zhao (22425801)

Algorithm membership function. by Mohamed Raef Smaoui (9865830)

Comparison of algorithms in two cases. by Yi Tao (178829)

Subjects: “…evolutionary genetic algorithm…”